import hdf5-1.14.5-1.el10

.gitignore

@@ -0,0 +1,2 @@
+SOURCES/hdf5_1.14.4.3+repack-1~exp3.debian.tar.xz
+SOURCES/hdf5-1.14.5.tar.gz

.hdf5.metadata

@@ -0,0 +1,2 @@
+830552f9a2007f0aee945eecfc00a53161da5817  SOURCES/hdf5_1.14.4.3+repack-1~exp3.debian.tar.xz
+29ecb629b952fa27992df9ddf05231522793f655  SOURCES/hdf5-1.14.5.tar.gz

SOURCES/h5comp

@@ -0,0 +1,10 @@
+#!/bin/bash
+
+ARCH=$(uname -m)
+
+case $ARCH in
+    x86_64 | ppc64 | ia64 | s390x ) BITS=64;;
+                                * ) BITS=32;;
+esac
+
+exec $0-${BITS} "$@"

SOURCES/hdf5-build.patch

@@ -0,0 +1,41 @@
+diff --git a/java/src/Makefile.am b/java/src/Makefile.am
+index aaa4052..0d66096 100644
+--- a/java/src/Makefile.am
++++ b/java/src/Makefile.am
+@@ -32,8 +32,8 @@ JAVAROOT = .classes
+ classes:
+ 	test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
+ 
+-jarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
+-hdf5_javadir = $(libdir)
++jarfile = $(PACKAGE_TARNAME).jar
++hdf5_javadir = $(prefix)/lib/java
+ 
+ pkgpath = hdf/hdf5lib
+ CLASSPATH_ENV=CLASSPATH=.:$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$$CLASSPATH
+diff --git a/java/test/Makefile.am b/java/test/Makefile.am
+index 9f39be9..d58f3cd 100644
+--- a/java/test/Makefile.am
++++ b/java/test/Makefile.am
+@@ -26,7 +26,7 @@ classes:
+ 	test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
+ 
+ pkgpath = test
+-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
++hdfjarfile = $(PACKAGE_TARNAME).jar
+ CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/junit.jar:$(top_srcdir)/java/lib/hamcrest-core.jar:$(top_srcdir)/java/lib/slf4j-api-2.0.6.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-2.0.6.jar:$$CLASSPATH
+ 
+ jarfile = jar$(PACKAGE_TARNAME)test.jar
+diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in
+index 0690081..9a784a1 100644
+--- a/java/test/junit.sh.in
++++ b/java/test/junit.sh.in
+@@ -48,7 +48,7 @@ BLDLIBDIR="$BLDDIR/testlibs"
+ HDFTEST_HOME="$top_srcdir/java/test"
+ DUMP_TESTFILES="$top_srcdir/tools/test/h5dump/testfiles"
+ 
+-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
++JARFILE=@PACKAGE_TARNAME@.jar
+ TESTJARFILE=jar@PACKAGE_TARNAME@test.jar
+ test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
+ 

SOURCES/hdf5-float128.patch

@@ -0,0 +1,11 @@
+diff -up hdf5-hdf5_1.14.5/configure.ac.float128 hdf5-hdf5_1.14.5/configure.ac
+--- hdf5-hdf5_1.14.5/configure.ac.float128	2024-09-30 08:50:29.000000000 -0600
++++ hdf5-hdf5_1.14.5/configure.ac	2024-10-03 19:17:46.998322936 -0600
+@@ -854,6 +854,7 @@ if test "X$HDF_FORTRAN" = "Xyes"; then
+   if test "$MY_FLT128_DIG" -gt "$MY_LDBL_DIG" ; then
+     AC_MSG_RESULT([yes])
+     AC_DEFINE([HAVE_FLOAT128], [1], [Determine if __float128 will be used in the Fortran wrappers])
++    AC_CHECK_SIZEOF([__float128])
+   else
+     ## Can't use __float128, but write an undef line anyway
+     AC_MSG_RESULT([no])

SOURCES/hdf5-wrappers.patch

@@ -0,0 +1,112 @@
+diff --git a/bin/h5cc.in b/bin/h5cc.in
+index 966bb40..c0f813f 100644
+--- a/bin/h5cc.in
++++ b/bin/h5cc.in
+@@ -89,10 +89,10 @@ CLINKERBASE="@CC@"
+ # paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
+ # from the hdf5 build. The order of the flags is intended to give precedence
+ # to the user's flags.
+-H5BLD_CFLAGS="@AM_CFLAGS@ @CFLAGS@"
++H5BLD_CFLAGS=
+ H5BLD_CPPFLAGS="@AM_CPPFLAGS@ @CPPFLAGS@"
+-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
+-H5BLD_LIBS="@LIBS@"
++H5BLD_LDFLAGS=
++H5BLD_LIBS=
+ 
+ CC="${HDF5_CC:-$CCBASE}"
+ CLINKER="${HDF5_CLINKER:-$CLINKERBASE}"
+@@ -105,7 +105,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
+ # available library is shared, it will be used by default.  The user can
+ # override either default, although choosing an unavailable library will result
+ # in link errors.
+-STATIC_AVAILABLE="@enable_static@"
++# Fedora prefers shared libraries
++STATIC_AVAILABLE=no
+ if test "${STATIC_AVAILABLE}" = "yes"; then
+   USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
+ else
+@@ -385,7 +386,7 @@ if test "x$do_link" = "xyes"; then
+   # paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
+   # from the hdf5 build. The order of the flags is intended to give precedence
+   # to the user's flags.
+-  $SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link
++  $SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args
+   status=$?
+ fi
+ 
+diff --git a/c++/src/h5c++.in b/c++/src/h5c++.in
+index 573d20d..50065e0 100644
+--- a/c++/src/h5c++.in
++++ b/c++/src/h5c++.in
+@@ -87,10 +87,10 @@ CXXLINKERBASE="@CXX@"
+ # paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
+ # from the hdf5 build. The order of the flags is intended to give precedence
+ # to the user's flags.
+-H5BLD_CXXFLAGS="@AM_CXXFLAGS@ @CXXFLAGS@"
++H5BLD_CXXFLAGS=
+ H5BLD_CPPFLAGS="@AM_CPPFLAGS@ @CPPFLAGS@"
+-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
+-H5BLD_LIBS="@LIBS@"
++H5BLD_LDFLAGS=
++H5BLD_LIBS=
+ 
+ CXX="${HDF5_CXX:-$CXXBASE}"
+ CXXLINKER="${HDF5_CXXLINKER:-$CXXLINKERBASE}"
+@@ -103,7 +103,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
+ # available library is shared, it will be used by default.  The user can
+ # override either default, although choosing an unavailable library will result
+ # in link errors.
+-STATIC_AVAILABLE="@enable_static@"
++# Fedora prefers shared libraries
++STATIC_AVAILABLE=no
+ if test "${STATIC_AVAILABLE}" = "yes"; then
+   USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
+ else
+@@ -385,7 +386,7 @@ if test "x$do_link" = "xyes"; then
+   # from the hdf5 build. The order of the flags is intended to give precedence
+   # to the user's flags.
+ 
+-  $SHOW $CXXLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CXXFLAGS $CXXFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link
++  $SHOW $CXXLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CXXFLAGS $CXXFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args
+ 
+   status=$?
+ fi
+diff --git a/fortran/src/h5fc.in b/fortran/src/h5fc.in
+index 661fde5..00b5f4b 100644
+--- a/fortran/src/h5fc.in
++++ b/fortran/src/h5fc.in
+@@ -83,11 +83,11 @@ FLINKERBASE="@FC@"
+ # libraries in $link_args, followed by any external library paths and libraries
+ # from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in from the hdf5 build.
+ # The order of the flags is intended to give precedence to the user's flags.
+-H5BLD_FCFLAGS="@AM_FCFLAGS@ @FCFLAGS@"
++H5BLD_FCFLAGS=
+ F9XMODFLAG="@F9XMODFLAG@"
+ F9XSUFFIXFLAG="@F9XSUFFIXFLAG@"
+-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
+-H5BLD_LIBS="@LIBS@"
++H5BLD_LDFLAGS=
++H5BLD_LIBS=
+ 
+ FC="${HDF5_FC:-$FCBASE}"
+ FLINKER="${HDF5_FLINKER:-$FLINKERBASE}"
+@@ -99,7 +99,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
+ # available library is shared, it will be used by default.  The user can
+ # override either default, although choosing an unavailable library will result
+ # in link errors.
+-STATIC_AVAILABLE="@enable_static@"
++# Fedora prefers shared libraries
++STATIC_AVAILABLE=no
+ if test "${STATIC_AVAILABLE}" = "yes"; then
+   USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
+ else
+@@ -363,7 +364,7 @@ if test "x$do_link" = "xyes"; then
+   # libraries in $link_args, followed by any external library paths and libraries
+   # from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in from the hdf5 build.
+   # The order of the flags is intended to give precedence to the user's flags.
+-  $SHOW $FLINKER $FCFLAGS $H5BLD_FCFLAGS $F9XSUFFIXFLAG $LDFLAGS $fmodules $link_objs $LIBS $link_args $shared_link
++  $SHOW $FLINKER $FCFLAGS $H5BLD_FCFLAGS $F9XSUFFIXFLAG $LDFLAGS $fmodules $link_objs $LIBS $link_args
+   status=$?
+ fi
+