|
|
|
Name: hdf5
|
|
|
|
Version: 1.8.0.snap5
|
|
|
|
Release: 1%{?dist}
|
|
|
|
Summary: A general purpose library and file format for storing scientific data
|
|
|
|
License: BSD
|
|
|
|
Group: System Environment/Libraries
|
|
|
|
URL: http://www.hdfgroup.org/HDF5/
|
|
|
|
#Source0: ftp://ftp.hdfgroup.org/HDF5/current/src/%{name}-%{version}.tar.gz
|
|
|
|
Source0: ftp://ftp.hdfgroup.uiuc.edu/pub/outgoing/hdf5/snapshots/v18/hdf5-1.8.0-snap5.tar.bz2
|
|
|
|
Source1: h5comp
|
|
|
|
Patch1: hdf5-1.8.0-signal.patch
|
|
|
|
Patch2: hdf5-1.8.0-destdir.patch
|
|
|
|
Patch3: hdf5-1.8.0-multiarch.patch
|
|
|
|
Patch4: hdf5-1.8.0-scaleoffset.patch
|
|
|
|
Patch10: hdf5-1.6.5-open.patch
|
|
|
|
Patch13: hdf5-1.6.6-free.patch
|
|
|
|
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
|
|
|
|
BuildRequires: krb5-devel, openssl-devel, zlib-devel, gcc-gfortran, time
|
|
|
|
|
|
|
|
%description
|
|
|
|
HDF5 is a general purpose library and file format for storing scientific data.
|
|
|
|
HDF5 can store two primary objects: datasets and groups. A dataset is
|
|
|
|
essentially a multidimensional array of data elements, and a group is a
|
|
|
|
structure for organizing objects in an HDF5 file. Using these two basic
|
|
|
|
objects, one can create and store almost any kind of scientific data
|
|
|
|
structure, such as images, arrays of vectors, and structured and unstructured
|
|
|
|
grids. You can also mix and match them in HDF5 files according to your needs.
|
|
|
|
|
|
|
|
|
|
|
|
%package devel
|
|
|
|
Summary: HDF5 development files
|
|
|
|
Group: Development/Libraries
|
|
|
|
Requires: %{name} = %{version}-%{release}
|
|
|
|
|
|
|
|
%description devel
|
|
|
|
HDF5 development headers and libraries.
|
|
|
|
|
|
|
|
|
|
|
|
%package static
|
|
|
|
Summary: HDF5 static libraries
|
|
|
|
Group: Development/Libraries
|
|
|
|
Requires: %{name}-devel = %{version}-%{release}
|
|
|
|
|
|
|
|
%description static
|
|
|
|
HDF5 static libraries.
|
|
|
|
|
|
|
|
|
|
|
|
%prep
|
|
|
|
%setup -q -n %{name}-1.8.0-snap5
|
|
|
|
%patch1 -p1 -b .signal
|
|
|
|
%patch2 -p1 -b .destdir
|
|
|
|
%patch3 -p1 -b .multiarch
|
|
|
|
%patch4 -p1 -b .scaleoffset
|
|
|
|
%patch10 -p1 -b .open
|
|
|
|
%patch13 -p1 -b .free
|
|
|
|
|
|
|
|
|
|
|
|
%build
|
|
|
|
export CC=gcc
|
|
|
|
export CXX=g++
|
|
|
|
export F9X=gfortran
|
|
|
|
# Must turn of production mode to preserve -g during compile
|
|
|
|
%configure --enable-production=no --enable-debug=no \
|
|
|
|
--enable-cxx --enable-fortran --enable-threadsafe \
|
|
|
|
--with-pthread --with-ssl
|
|
|
|
#Multiarch header
|
|
|
|
%ifarch x86_64 ppc64 ia64 s390
|
|
|
|
cp src/H5pubconf.h \
|
|
|
|
src/H5pubconf-64.h
|
|
|
|
%else
|
|
|
|
cp src/H5pubconf.h \
|
|
|
|
src/H5pubconf-32.h
|
|
|
|
%endif
|
|
|
|
make
|
|
|
|
|
|
|
|
|
|
|
|
%install
|
|
|
|
rm -rf $RPM_BUILD_ROOT
|
|
|
|
make install DESTDIR=${RPM_BUILD_ROOT}
|
|
|
|
rm -rf $RPM_BUILD_ROOT/%{_libdir}/*.la $RPM_BUILD_ROOT/%{_libdir}/*.settings
|
|
|
|
#Fortran modules
|
|
|
|
mkdir -p ${RPM_BUILD_ROOT}%{_libdir}/gfortran/modules
|
|
|
|
mv ${RPM_BUILD_ROOT}%{_includedir}/*.mod ${RPM_BUILD_ROOT}%{_libdir}/gfortran/modules/
|
|
|
|
|
|
|
|
#Fixup headers and scripts for multiarch
|
|
|
|
%ifarch x86_64 ppc64 ia64 s390
|
|
|
|
mv ${RPM_BUILD_ROOT}%{_includedir}/H5pubconf.h \
|
|
|
|
${RPM_BUILD_ROOT}%{_includedir}/H5pubconf-64.h
|
|
|
|
for x in h5c++ h5cc h5fc
|
|
|
|
do
|
|
|
|
mv ${RPM_BUILD_ROOT}%{_bindir}/${x} \
|
|
|
|
${RPM_BUILD_ROOT}%{_bindir}/${x}-64
|
|
|
|
install -m 0755 %SOURCE1 ${RPM_BUILD_ROOT}%{_bindir}/${x}
|
|
|
|
done
|
|
|
|
%else
|
|
|
|
mv ${RPM_BUILD_ROOT}%{_includedir}/H5pubconf.h \
|
|
|
|
${RPM_BUILD_ROOT}%{_includedir}/H5pubconf-32.h
|
|
|
|
for x in h5c++ h5cc h5fc
|
|
|
|
do
|
|
|
|
mv ${RPM_BUILD_ROOT}%{_bindir}/${x} \
|
|
|
|
${RPM_BUILD_ROOT}%{_bindir}/${x}-32
|
|
|
|
install -m 0755 %SOURCE1 ${RPM_BUILD_ROOT}%{_bindir}/${x}
|
|
|
|
done
|
|
|
|
%endif
|
|
|
|
|
|
|
|
|
|
|
|
%check
|
|
|
|
make check
|
|
|
|
|
|
|
|
|
|
|
|
%clean
|
|
|
|
rm -rf $RPM_BUILD_ROOT
|
|
|
|
|
|
|
|
|
|
|
|
%post -p /sbin/ldconfig
|
|
|
|
|
|
|
|
%postun -p /sbin/ldconfig
|
|
|
|
|
|
|
|
|
|
|
|
%files
|
|
|
|
%defattr(-,root,root,-)
|
|
|
|
%doc COPYING MANIFEST README.txt release_docs/RELEASE.txt
|
|
|
|
%doc release_docs/HISTORY*.txt
|
|
|
|
%{_bindir}/gif2h5
|
|
|
|
%{_bindir}/h52gif
|
|
|
|
%{_bindir}/h52gifgentst
|
|
|
|
%{_bindir}/h5copy
|
|
|
|
%{_bindir}/h5debug
|
|
|
|
%{_bindir}/h5diff
|
|
|
|
%{_bindir}/h5dump
|
|
|
|
%{_bindir}/h5import
|
|
|
|
%{_bindir}/h5jam
|
|
|
|
%{_bindir}/h5ls
|
|
|
|
%{_bindir}/h5mkgrp
|
|
|
|
%{_bindir}/h5repack
|
|
|
|
%{_bindir}/h5repart
|
|
|
|
%{_bindir}/h5stat
|
|
|
|
%{_bindir}/h5unjam
|
|
|
|
%{_libdir}/*.so.*
|
|
|
|
|
|
|
|
%files devel
|
|
|
|
%defattr(-,root,root,-)
|
|
|
|
%{_bindir}/h5c++
|
|
|
|
%{_bindir}/h5c++-*
|
|
|
|
%{_bindir}/h5cc
|
|
|
|
%{_bindir}/h5cc-*
|
|
|
|
%{_bindir}/h5fc
|
|
|
|
%{_bindir}/h5fc-*
|
|
|
|
%{_bindir}/h5redeploy
|
|
|
|
%{_includedir}/*.h
|
|
|
|
%{_libdir}/*.so
|
|
|
|
%{_libdir}/gfortran/modules/*.mod
|
|
|
|
|
|
|
|
%files static
|
|
|
|
%defattr(-,root,root,-)
|
|
|
|
%{_libdir}/*.a
|
|
|
|
|
|
|
|
|
|
|
|
%changelog
|
|
|
|
* Mon May 5 2008 Orion Poplawski <orion@cora.nwra.com> 1.8.0.snap5-1
|
|
|
|
- Update to 1.8.0-snap5
|
|
|
|
|
|
|
|
* Tue Mar 4 2008 Orion Poplawski <orion@cora.nwra.com> 1.8.0-2
|
|
|
|
- Remove failing test for now
|
|
|
|
|
|
|
|
* Fri Feb 29 2008 Orion Poplawski <orion@cora.nwra.com> 1.8.0-1
|
|
|
|
- Update to 1.8.0, drop upstreamed patches
|
|
|
|
- Update signal patch
|
|
|
|
- Move static libraries into -static sub-package
|
|
|
|
- Make -devel multiarch (bug #341501)
|
|
|
|
|
|
|
|
* Wed Feb 6 2008 Orion Poplawski <orion@cora.nwra.com> 1.6.6-7
|
|
|
|
- Add patch to fix strict-aliasing
|
|
|
|
- Disable production mode to enable debuginfo
|
|
|
|
|
|
|
|
* Tue Feb 5 2008 Orion Poplawski <orion@cora.nwra.com> 1.6.6-6
|
|
|
|
- Add patch to fix calling free() in H5PropList.cpp
|
|
|
|
|
|
|
|
* Tue Feb 5 2008 Orion Poplawski <orion@cora.nwra.com> 1.6.6-5
|
|
|
|
- Add patch to support s390 (bug #431510)
|
|
|
|
|
|
|
|
* Mon Jan 7 2008 Orion Poplawski <orion@cora.nwra.com> 1.6.6-4
|
|
|
|
- Add patches to support sparc (bug #427651)
|
|
|
|
|
|
|
|
* Tue Dec 4 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.6-3
|
|
|
|
- Rebuild against new openssl
|
|
|
|
|
|
|
|
* Fri Nov 23 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.6-2
|
|
|
|
- Add patch to build on alpha (bug #396391)
|
|
|
|
|
|
|
|
* Wed Oct 17 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.6-1
|
|
|
|
- Update to 1.6.6, drop upstreamed patches
|
|
|
|
- Explicitly set compilers
|
|
|
|
|
|
|
|
* Fri Aug 24 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.5-9
|
|
|
|
- Update license tag to BSD
|
|
|
|
- Rebuild for BuildID
|
|
|
|
|
|
|
|
* Wed Aug 8 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.5-8
|
|
|
|
- Fix memset typo
|
|
|
|
- Pass mode to open with O_CREAT
|
|
|
|
|
|
|
|
* Mon Feb 12 2007 Orion Poplawski <orion@cora.nwra.com> 1.6.5-7
|
|
|
|
- New project URL
|
|
|
|
- Add patch to use POSIX sort key option
|
|
|
|
- Remove useless and multilib conflicting Makefiles from html docs
|
|
|
|
(bug #228365)
|
|
|
|
- Make hdf5-devel own %{_docdir}/%{name}
|
|
|
|
|
|
|
|
* Tue Aug 29 2006 Orion Poplawski <orion@cora.nwra.com> 1.6.5-6
|
|
|
|
- Rebuild for FC6
|
|
|
|
|
|
|
|
* Wed Mar 15 2006 Orion Poplawski <orion@cora.nwra.com> 1.6.5-5
|
|
|
|
- Change rpath patch to not need autoconf
|
|
|
|
- Add patch for libtool on x86_64
|
|
|
|
- Fix shared lib permissions
|
|
|
|
|
|
|
|
* Mon Mar 13 2006 Orion Poplawski <orion@cora.nwra.com> 1.6.5-4
|
|
|
|
- Add patch to avoid HDF setting the compiler flags
|
|
|
|
|
|
|
|
* Mon Feb 13 2006 Orion Poplawski <orion@cora.nwra.com> 1.6.5-3
|
|
|
|
- Rebuild for gcc/glibc changes
|
|
|
|
|
|
|
|
* Wed Dec 21 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.5-2
|
|
|
|
- Don't ship h5perf with missing library
|
|
|
|
|
|
|
|
* Wed Dec 21 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.5-1
|
|
|
|
- Update to 1.6.5
|
|
|
|
|
|
|
|
* Wed Dec 21 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-9
|
|
|
|
- Rebuild
|
|
|
|
|
|
|
|
* Wed Nov 30 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-8
|
|
|
|
- Package fortran files properly
|
|
|
|
- Move compiler wrappers to devel
|
|
|
|
|
|
|
|
* Fri Nov 18 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-7
|
|
|
|
- Add patch for fortran compilation on ppc
|
|
|
|
|
|
|
|
* Wed Nov 16 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-6
|
|
|
|
- Bump for new openssl
|
|
|
|
|
|
|
|
* Tue Sep 20 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-5
|
|
|
|
- Enable fortran since the gcc bug is now fixed
|
|
|
|
|
|
|
|
* Tue Jul 05 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-4
|
|
|
|
- Make example scripts executable
|
|
|
|
|
|
|
|
* Wed Jul 01 2005 Orion Poplawski <orion@cora.nwra.com> 1.6.4-3
|
|
|
|
- Add --enable-threads --with-pthreads to configure
|
|
|
|
- Add %check
|
|
|
|
- Add some %docs
|
|
|
|
- Use %makeinstall
|
|
|
|
- Add patch to fix test for h5repack
|
|
|
|
- Add patch to fix h5diff_attr.c
|
|
|
|
|
|
|
|
* Mon Jun 27 2005 Tom "spot" Callaway <tcallawa@redhat.com> 1.6.4-2
|
|
|
|
- remove szip from spec, since szip license doesn't meet Fedora standards
|
|
|
|
|
|
|
|
* Sun Apr 3 2005 Tom "spot" Callaway <tcallawa@redhat.com> 1.6.4-1
|
|
|
|
- inital package for Fedora Extras
|