Orion Poplawski
17 years ago
parent
9524502e0e
commit
6d6a47ccf9
@ -1 +1 @@
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hdf5-1.6.5.tar.gz
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hdf5-1.6.6.tar.gz
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@ -1,15 +0,0 @@
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--- hdf5-1.6.4/fortran/config/linux-gnulibc1.BAD 2005-04-03 12:55:55.000000000 -0500
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+++ hdf5-1.6.4/fortran/config/linux-gnulibc1 2005-04-03 12:56:50.000000000 -0500
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@@ -25,7 +25,11 @@
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# The default Fortran 90 compiler
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if test "X-" = "X-$F9X"; then
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case $CC_BASENAME in
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- gcc*|pgcc*)
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+ gcc*)
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+ F9X=gfortran
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+ F9X_BASENAME=gfortran
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+ ;;
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+ pgcc*)
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F9X=pgf90
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F9X_BASENAME=pgf90
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;;
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@ -1,11 +0,0 @@
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--- hdf5-1.6.4/tools/h5repack/testh5repack_make.c.bad 2005-06-30 14:50:32.000000000 -0600
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+++ hdf5-1.6.4/tools/h5repack/testh5repack_make.c 2005-06-30 14:45:48.000000000 -0600
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@@ -896,7 +896,7 @@
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hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
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int buf[DIM1][DIM2];
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int i, j, n;
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- char name[5];
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+ char name[6];
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for (i=n=0; i<DIM1; i++){
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@ -1,28 +0,0 @@
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--- hdf5-1.6.5/config/gnu-flags.orig 2005-10-28 14:15:26.000000000 -0600
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+++ hdf5-1.6.5/config/gnu-flags 2006-03-13 10:59:58.000000000 -0700
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@@ -107,25 +107,6 @@
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gcc*|egcs*|pgcc*)
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# Architecture-specific flags
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arch=
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- case "$host_os-$host_cpu" in
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- # FreeBSD sets the information from "uname -m" to the general machine
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- # architecture, not the specific CPU for the machine, so even our
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- # Pentium II Xeon server is set to "i386". Once we know we are on a FreeBSD
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- # machine, use the "sysctl" command to get the CPU hardware model.
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- freebsd*-i386)
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- host_cpu_model=`sysctl -n hw.model`
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- case "$host_cpu_model" in
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- # Hmm.. this might not catch Celerons, but it won't hurt them either...
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- *Pro*|*II*|*III*|*IV*|*Athlon*)
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- arch="-march=i686"
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- ;;
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- esac
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- ;;
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-
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- *-i686)
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- arch="-march=i686"
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- ;;
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- esac
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# Host-specific flags
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case "`hostname`" in
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@ -1,81 +0,0 @@
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--- hdf5-1.6.5/tools/lib/h5diff_attr.c.orig 2005-12-21 12:08:45.000000000 -0700
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+++ hdf5-1.6.5/tools/lib/h5diff_attr.c 2005-12-21 12:11:17.000000000 -0700
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@@ -61,8 +61,8 @@
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int rank2; /* rank of dataset */
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hsize_t dims1[H5S_MAX_RANK];/* dimensions of dataset */
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hsize_t dims2[H5S_MAX_RANK];/* dimensions of dataset */
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- char name1[255];
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- char name2[255];
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+ char name1[255],np1[512];
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+ char name2[255],np2[512];
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int n1, n2, i, j;
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int ret=0;
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hsize_t nfound;
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@@ -196,21 +196,21 @@
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* array compare
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*-------------------------------------------------------------------------
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*/
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- sprintf(name1,"%s of <%s>",name1,path1);
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- sprintf(name2,"%s of <%s>",name2,path2);
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+ snprintf(np1,sizeof(np1),"%s of <%s>",name1,path1);
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+ snprintf(np2,sizeof(np2),"%s of <%s>",name2,path2);
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/* always print name */
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if (options->m_verbose)
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{
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- printf( "Attribute: <%s> and <%s>\n",name1,name2);
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+ printf( "Attribute: <%s> and <%s>\n",np1,np2);
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nfound = diff_array(buf1,
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buf2,
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nelmts1,
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rank1,
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dims1,
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options,
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- name1,
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- name2,
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+ np1,
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+ np2,
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mtype1_id,
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attr1_id,
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attr2_id);
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@@ -230,8 +230,8 @@
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rank1,
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dims1,
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options,
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- name1,
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- name2,
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+ np1,
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+ np2,
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mtype1_id,
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attr1_id,
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attr2_id);
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@@ -239,15 +239,15 @@
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options->m_quiet=0;
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if (nfound)
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{
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- printf( "Attribute: <%s> and <%s>\n",name1,name2);
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+ printf( "Attribute: <%s> and <%s>\n",np1,np2);
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nfound = diff_array(buf1,
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buf2,
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nelmts1,
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rank1,
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dims1,
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options,
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- name1,
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- name2,
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+ np1,
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+ np2,
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mtype1_id,
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attr1_id,
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attr2_id);
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@@ -263,8 +263,8 @@
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rank1,
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dims1,
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options,
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- name1,
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- name2,
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+ np1,
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+ np2,
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mtype1_id,
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attr1_id,
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attr2_id);
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@ -1,11 +0,0 @@
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--- hdf5-1.6.5/src/H5R.c.memset 2005-08-20 13:28:52.000000000 -0600
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+++ hdf5-1.6.5/src/H5R.c 2007-08-08 09:40:01.000000000 -0600
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@@ -190,7 +190,7 @@
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} /* end if */
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/* Zero the heap ID out, may leak heap space if user is re-using reference and doesn't have garbage collection on */
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- HDmemset(ref,H5R_DSET_REG_REF_BUF_SIZE,0);
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+ HDmemset(ref,0,H5R_DSET_REG_REF_BUF_SIZE);
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/* Get the amount of space required to serialize the selection */
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if ((buf_size = H5S_SELECT_SERIAL_SIZE(space)) < 0)
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@ -0,0 +1,11 @@
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--- hdf5-1.6.6/tools/h5dump/testh5dump.sh.in.tail 2007-10-17 10:37:38.000000000 -0600
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+++ hdf5-1.6.6/tools/h5dump/testh5dump.sh.in 2007-10-17 10:38:26.000000000 -0600
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@@ -81,7 +81,7 @@
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nerrors="`expr $nerrors + 1`"
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else
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# Skip the first three lines, which are label lines, before cmp.
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- if tail +4l $expect | $CMP - $actual; then
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+ if tail -n +4 $expect | $CMP - $actual; then
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echo " PASSED"
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else
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echo "*FAILED*"
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