MSVSphere Packaging Team
12 months ago
commit
286d03373d
@ -0,0 +1,2 @@
|
||||
SOURCES/hdf5-1.12.1.tar.bz2
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SOURCES/hdf5_1.12.0+repack-1~exp2.debian.tar.xz
|
||||
@ -0,0 +1,2 @@
|
||||
665eed49a004f96f852887bb2b232dd7d3d8d8a0 SOURCES/hdf5-1.12.1.tar.bz2
|
||||
0e304458d9a9b7524534f84a979cec9da2840722 SOURCES/hdf5_1.12.0+repack-1~exp2.debian.tar.xz
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@ -0,0 +1,10 @@
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#!/bin/bash
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ARCH=$(uname -m)
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case $ARCH in
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x86_64 | ppc64 | ia64 | s390x ) BITS=64;;
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* ) BITS=32;;
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esac
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exec $0-${BITS} "$@"
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@ -0,0 +1,20 @@
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--- hdf5-1.12.0/src/Makefile.am~ 2020-02-29 00:29:58.000000000 +0100
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+++ hdf5-1.12.0/src/Makefile.am 2021-02-26 16:10:03.612252484 +0100
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@@ -156,8 +156,6 @@
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# Remove the generated .c file if errors occur unless HDF5_Make_Ignore
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# is set to ignore the error.
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H5Tinit.c: H5detect$(EXEEXT)
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- LD_LIBRARY_PATH="$$LD_LIBRARY_PATH`echo $(LDFLAGS) | \
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- sed -e 's/-L/:/g' -e 's/ //g'`" \
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$(RUNSERIAL) ./H5detect$(EXEEXT) $@ || \
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(test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
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($(RM) $@ ; exit 1)
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@@ -168,8 +166,6 @@
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# Remove the generated .c file if errors occur unless HDF5_Make_Ignore
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# is set to ignore the error.
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H5lib_settings.c: H5make_libsettings$(EXEEXT) libhdf5.settings
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- LD_LIBRARY_PATH="$$LD_LIBRARY_PATH`echo $(LDFLAGS) | \
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- sed -e 's/-L/:/g' -e 's/ //g'`" \
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$(RUNSERIAL) ./H5make_libsettings$(EXEEXT) $@ || \
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(test $$HDF5_Make_Ignore && echo "*** Error ignored") || \
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($(RM) $@ ; exit 1)
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@ -0,0 +1,145 @@
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diff --git a/java/examples/datasets/JavaDatasetExample.sh.in b/java/examples/datasets/JavaDatasetExample.sh.in
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index f29739a..fc9cddb 100644
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--- a/java/examples/datasets/JavaDatasetExample.sh.in
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+++ b/java/examples/datasets/JavaDatasetExample.sh.in
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@@ -39,7 +39,7 @@ HDFLIB_HOME="$top_srcdir/java/lib"
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BLDDIR="."
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BLDLIBDIR="$BLDDIR/testlibs"
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HDFTEST_HOME="$top_srcdir/java/examples/datasets"
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-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
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+JARFILE=@PACKAGE_TARNAME@.jar
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TESTJARFILE=jar@PACKAGE_TARNAME@datasets.jar
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test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
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diff --git a/java/examples/datasets/Makefile.am b/java/examples/datasets/Makefile.am
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index 41a914b..195201a 100644
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--- a/java/examples/datasets/Makefile.am
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+++ b/java/examples/datasets/Makefile.am
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@@ -26,7 +26,7 @@ classes:
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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pkgpath = examples/datasets
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-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
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+hdfjarfile = $(PACKAGE_TARNAME).jar
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CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
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jarfile = jar$(PACKAGE_TARNAME)datasets.jar
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diff --git a/java/examples/datatypes/JavaDatatypeExample.sh.in b/java/examples/datatypes/JavaDatatypeExample.sh.in
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index e26d8c0..f6a9d87 100644
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--- a/java/examples/datatypes/JavaDatatypeExample.sh.in
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+++ b/java/examples/datatypes/JavaDatatypeExample.sh.in
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@@ -36,7 +36,7 @@ HDFLIB_HOME="$top_srcdir/java/lib"
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BLDDIR="."
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BLDLIBDIR="$BLDDIR/testlibs"
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HDFTEST_HOME="$top_srcdir/java/examples/datatypes"
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-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
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+JARFILE=@PACKAGE_TARNAME@.jar
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TESTJARFILE=jar@PACKAGE_TARNAME@datatypes.jar
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test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
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diff --git a/java/examples/datatypes/Makefile.am b/java/examples/datatypes/Makefile.am
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index 90790f7..450edef 100644
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--- a/java/examples/datatypes/Makefile.am
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+++ b/java/examples/datatypes/Makefile.am
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@@ -26,7 +26,7 @@ classes:
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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pkgpath = examples/datatypes
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-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
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+hdfjarfile = $(PACKAGE_TARNAME).jar
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CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
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jarfile = jar$(PACKAGE_TARNAME)datatypes.jar
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diff --git a/java/examples/groups/JavaGroupExample.sh.in b/java/examples/groups/JavaGroupExample.sh.in
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index 3b0e9d1..416c69f 100644
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--- a/java/examples/groups/JavaGroupExample.sh.in
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+++ b/java/examples/groups/JavaGroupExample.sh.in
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@@ -37,7 +37,7 @@ BLDDIR="."
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BLDLIBDIR="$BLDDIR/testlibs"
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BLDITERDIR="./groups"
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HDFTEST_HOME="$top_srcdir/java/examples/groups"
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-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
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+JARFILE=@PACKAGE_TARNAME@.jar
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TESTJARFILE=jar@PACKAGE_TARNAME@groups.jar
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test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
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test -d $BLDITERDIR || mkdir -p $BLDITERDIR
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diff --git a/java/examples/groups/Makefile.am b/java/examples/groups/Makefile.am
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index bfde9ae..f48a5b9 100644
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--- a/java/examples/groups/Makefile.am
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+++ b/java/examples/groups/Makefile.am
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@@ -26,7 +26,7 @@ classes:
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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pkgpath = examples/groups
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-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
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+hdfjarfile = $(PACKAGE_TARNAME).jar
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CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
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jarfile = jar$(PACKAGE_TARNAME)groups.jar
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diff --git a/java/examples/intro/JavaIntroExample.sh.in b/java/examples/intro/JavaIntroExample.sh.in
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index db741e5..d0ba65d 100644
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--- a/java/examples/intro/JavaIntroExample.sh.in
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+++ b/java/examples/intro/JavaIntroExample.sh.in
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@@ -36,7 +36,7 @@ HDFLIB_HOME="$top_srcdir/java/lib"
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BLDDIR="."
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BLDLIBDIR="$BLDDIR/testlibs"
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HDFTEST_HOME="$top_srcdir/java/examples/intro"
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-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
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+JARFILE=@PACKAGE_TARNAME@.jar
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TESTJARFILE=jar@PACKAGE_TARNAME@intro.jar
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test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
|
||||
|
||||
diff --git a/java/examples/intro/Makefile.am b/java/examples/intro/Makefile.am
|
||||
index 7d1aeab..01a10c9 100644
|
||||
--- a/java/examples/intro/Makefile.am
|
||||
+++ b/java/examples/intro/Makefile.am
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||||
@@ -26,7 +26,7 @@ classes:
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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|
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pkgpath = examples/intro
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-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
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+hdfjarfile = $(PACKAGE_TARNAME).jar
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CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
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jarfile = jar$(PACKAGE_TARNAME)intro.jar
|
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diff --git a/java/src/Makefile.am b/java/src/Makefile.am
|
||||
index 98630e6..fd8d057 100644
|
||||
--- a/java/src/Makefile.am
|
||||
+++ b/java/src/Makefile.am
|
||||
@@ -32,8 +32,8 @@ JAVAROOT = .classes
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classes:
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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|
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-jarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
|
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-hdf5_javadir = $(libdir)
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+jarfile = $(PACKAGE_TARNAME).jar
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+hdf5_javadir = $(prefix)/lib/java
|
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|
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pkgpath = hdf/hdf5lib
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CLASSPATH_ENV=CLASSPATH=.:$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$$CLASSPATH
|
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diff --git a/java/test/Makefile.am b/java/test/Makefile.am
|
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index 08e79e3..b336c2f 100644
|
||||
--- a/java/test/Makefile.am
|
||||
+++ b/java/test/Makefile.am
|
||||
@@ -26,7 +26,7 @@ classes:
|
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test -d $(@D)/$(JAVAROOT) || $(MKDIR_P) $(@D)/$(JAVAROOT)
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||||
|
||||
pkgpath = test
|
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-hdfjarfile = jar$(PACKAGE_TARNAME)-$(PACKAGE_VERSION).jar
|
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+hdfjarfile = $(PACKAGE_TARNAME).jar
|
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CLASSPATH_ENV=CLASSPATH=.:$(JAVAROOT):$(top_builddir)/java/src/$(hdfjarfile):$(top_srcdir)/java/lib/junit.jar:$(top_srcdir)/java/lib/hamcrest-core.jar:$(top_srcdir)/java/lib/slf4j-api-1.7.25.jar:$(top_srcdir)/java/lib/ext/slf4j-simple-1.7.25.jar:$$CLASSPATH
|
||||
|
||||
jarfile = jar$(PACKAGE_TARNAME)test.jar
|
||||
diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in
|
||||
index 39db296..83d6c7c 100644
|
||||
--- a/java/test/junit.sh.in
|
||||
+++ b/java/test/junit.sh.in
|
||||
@@ -47,7 +47,7 @@ BLDLIBDIR="$BLDDIR/testlibs"
|
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HDFTEST_HOME="$top_srcdir/java/test"
|
||||
TOOLS_TESTFILES="$top_srcdir/tools/testfiles"
|
||||
|
||||
-JARFILE=jar@PACKAGE_TARNAME@-@PACKAGE_VERSION@.jar
|
||||
+JARFILE=@PACKAGE_TARNAME@.jar
|
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TESTJARFILE=jar@PACKAGE_TARNAME@test.jar
|
||||
test -d $BLDLIBDIR || mkdir -p $BLDLIBDIR
|
||||
|
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@ -0,0 +1,37 @@
|
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commit 3ea6f8c17228d2629e419563138a6180bc4a5a6a
|
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Author: Orion Poplawski <orion@nwra.com>
|
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Date: Sun Jan 30 15:21:08 2022 -0700
|
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|
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Mark minusone as a PARAMETER in tH5A_1_8.F90.
|
||||
|
||||
diff --git a/fortran/test/tH5A_1_8.F90 b/fortran/test/tH5A_1_8.F90
|
||||
index 4e02c58a39..c2f8e9984a 100644
|
||||
--- a/fortran/test/tH5A_1_8.F90
|
||||
+++ b/fortran/test/tH5A_1_8.F90
|
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@@ -776,7 +776,7 @@ SUBROUTINE test_attr_info_by_idx(new_format, fcpl, fapl, total_error)
|
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|
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INTEGER :: Input1
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||||
INTEGER(HSIZE_T) :: hzero = 0_HSIZE_T
|
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- INTEGER :: minusone = -1
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+ INTEGER, PARAMETER :: minusone = -1
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INTEGER(HSIZE_T) :: htmp
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|
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data_dims = 0
|
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@@ -1427,7 +1427,7 @@ SUBROUTINE test_attr_delete_by_idx(new_format, fcpl, fapl, total_error)
|
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INTEGER :: u ! Local index variable
|
||||
INTEGER :: Input1
|
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INTEGER(HSIZE_T) :: hzero = 0_HSIZE_T
|
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- INTEGER :: minusone = -1
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+ INTEGER, PARAMETER :: minusone = -1
|
||||
|
||||
data_dims = 0
|
||||
|
||||
@@ -2268,7 +2268,7 @@ SUBROUTINE test_attr_corder_create_basic( fcpl, fapl, total_error )
|
||||
INTEGER :: error
|
||||
|
||||
INTEGER :: crt_order_flags
|
||||
- INTEGER :: minusone = -1
|
||||
+ INTEGER, PARAMETER :: minusone = -1
|
||||
|
||||
! Output message about test being performed
|
||||
! WRITE(*,*) " - Testing Basic Code for Attributes with Creation Order Info"
|
||||
@ -0,0 +1,109 @@
|
||||
diff -up hdf5-1.10.7/bin/h5cc.in.wrappers hdf5-1.10.7/bin/h5cc.in
|
||||
--- hdf5-1.10.7/bin/h5cc.in.wrappers 2020-10-07 20:24:29.127283333 -0600
|
||||
+++ hdf5-1.10.7/bin/h5cc.in 2020-10-07 20:27:05.289536904 -0600
|
||||
@@ -89,10 +89,10 @@ CLINKERBASE="@CC@"
|
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
|
||||
# from the hdf5 build. The order of the flags is intended to give precedence
|
||||
# to the user's flags.
|
||||
-H5BLD_CFLAGS="@AM_CFLAGS@ @CFLAGS@"
|
||||
+H5BLD_CFLAGS=
|
||||
H5BLD_CPPFLAGS="@AM_CPPFLAGS@ @CPPFLAGS@"
|
||||
-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
|
||||
-H5BLD_LIBS="@LIBS@"
|
||||
+H5BLD_LDFLAGS=
|
||||
+H5BLD_LIBS=
|
||||
|
||||
CC="${HDF5_CC:-$CCBASE}"
|
||||
CLINKER="${HDF5_CLINKER:-$CLINKERBASE}"
|
||||
@@ -105,7 +105,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
|
||||
# available library is shared, it will be used by default. The user can
|
||||
# override either default, although choosing an unavailable library will result
|
||||
# in link errors.
|
||||
-STATIC_AVAILABLE="@enable_static@"
|
||||
+# Fedora prefers shared libraries
|
||||
+STATIC_AVAILABLE=no
|
||||
if test "${STATIC_AVAILABLE}" = "yes"; then
|
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
|
||||
else
|
||||
@@ -385,7 +386,7 @@ if test "x$do_link" = "xyes"; then
|
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
|
||||
# from the hdf5 build. The order of the flags is intended to give precedence
|
||||
# to the user's flags.
|
||||
- $SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link
|
||||
+ $SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args
|
||||
status=$?
|
||||
fi
|
||||
|
||||
diff -up hdf5-1.10.7/c++/src/h5c++.in.wrappers hdf5-1.10.7/c++/src/h5c++.in
|
||||
--- hdf5-1.10.7/c++/src/h5c++.in.wrappers 2020-08-27 21:38:23.000000000 -0600
|
||||
+++ hdf5-1.10.7/c++/src/h5c++.in 2020-10-07 20:24:29.126283325 -0600
|
||||
@@ -87,10 +87,10 @@ CXXLINKERBASE="@CXX@"
|
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in
|
||||
# from the hdf5 build. The order of the flags is intended to give precedence
|
||||
# to the user's flags.
|
||||
-H5BLD_CXXFLAGS="@AM_CXXFLAGS@ @CXXFLAGS@"
|
||||
+H5BLD_CXXFLAGS=
|
||||
H5BLD_CPPFLAGS="@AM_CPPFLAGS@ @CPPFLAGS@"
|
||||
-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
|
||||
-H5BLD_LIBS="@LIBS@"
|
||||
+H5BLD_LDFLAGS=
|
||||
+H5BLD_LIBS=
|
||||
|
||||
CXX="${HDF5_CXX:-$CXXBASE}"
|
||||
CXXLINKER="${HDF5_CLINKER:-$CXXLINKERBASE}"
|
||||
@@ -103,7 +103,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
|
||||
# available library is shared, it will be used by default. The user can
|
||||
# override either default, although choosing an unavailable library will result
|
||||
# in link errors.
|
||||
-STATIC_AVAILABLE="@enable_static@"
|
||||
+# Fedora prefers shared libraries
|
||||
+STATIC_AVAILABLE=no
|
||||
if test "${STATIC_AVAILABLE}" = "yes"; then
|
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
|
||||
else
|
||||
@@ -385,7 +386,7 @@ if test "x$do_link" = "xyes"; then
|
||||
# from the hdf5 build. The order of the flags is intended to give precedence
|
||||
# to the user's flags.
|
||||
|
||||
- $SHOW $CXXLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CXXFLAGS $CXXFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link
|
||||
+ $SHOW $CXXLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CXXFLAGS $CXXFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args
|
||||
|
||||
status=$?
|
||||
fi
|
||||
diff -up hdf5-1.10.7/fortran/src/h5fc.in.wrappers hdf5-1.10.7/fortran/src/h5fc.in
|
||||
--- hdf5-1.10.7/fortran/src/h5fc.in.wrappers 2020-08-27 21:38:23.000000000 -0600
|
||||
+++ hdf5-1.10.7/fortran/src/h5fc.in 2020-10-07 20:25:53.793962985 -0600
|
||||
@@ -83,11 +83,11 @@ FLINKERBASE="@FC@"
|
||||
# libraries in $link_args, followed by any external library paths and libraries
|
||||
# from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in from the hdf5 build.
|
||||
# The order of the flags is intended to give precedence to the user's flags.
|
||||
-H5BLD_FCFLAGS="@AM_FCFLAGS@ @FCFLAGS@"
|
||||
+H5BLD_FCFLAGS=
|
||||
F9XMODFLAG="@F9XMODFLAG@"
|
||||
F9XSUFFIXFLAG="@F9XSUFFIXFLAG@"
|
||||
-H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@"
|
||||
-H5BLD_LIBS="@LIBS@"
|
||||
+H5BLD_LDFLAGS=
|
||||
+H5BLD_LIBS=
|
||||
|
||||
FC="${HDF5_FC:-$FCBASE}"
|
||||
FLINKER="${HDF5_FLINKER:-$FLINKERBASE}"
|
||||
@@ -99,7 +99,8 @@ LIBS="${HDF5_LIBS:-$LIBSBASE}"
|
||||
# available library is shared, it will be used by default. The user can
|
||||
# override either default, although choosing an unavailable library will result
|
||||
# in link errors.
|
||||
-STATIC_AVAILABLE="@enable_static@"
|
||||
+# Fedora prefers shared libraries
|
||||
+STATIC_AVAILABLE=no
|
||||
if test "${STATIC_AVAILABLE}" = "yes"; then
|
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}"
|
||||
else
|
||||
@@ -363,7 +364,7 @@ if test "x$do_link" = "xyes"; then
|
||||
# libraries in $link_args, followed by any external library paths and libraries
|
||||
# from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in from the hdf5 build.
|
||||
# The order of the flags is intended to give precedence to the user's flags.
|
||||
- $SHOW $FLINKER $FCFLAGS $H5BLD_FCFLAGS $F9XSUFFIXFLAG $LDFLAGS $fmodules $link_objs $LIBS $link_args $shared_link
|
||||
+ $SHOW $FLINKER $FCFLAGS $H5BLD_FCFLAGS $F9XSUFFIXFLAG $LDFLAGS $fmodules $link_objs $LIBS $link_args
|
||||
status=$?
|
||||
fi
|
||||
|
||||
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Reference in new issue