Initial import (#566725).
Mario Ceresa
15 years ago
parent
7853737933
commit
2a156e2f4f
@ -0,0 +1 @@
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/gdcm-2.0.16.tar.bz2
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FIND_PATH(CHARLS_INCLUDE_DIR CharLS/interface.h
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/usr/local/include
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/usr/include
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)
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FIND_LIBRARY(CHARLS_LIBRARY
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NAMES CharLS
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PATHS /usr/lib /usr/local/lib /usr/lib64 /usr/local/lib64
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)
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IF (CHARLS_LIBRARY AND CHARLS_INCLUDE_DIR)
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SET(CHARLS_LIBRARIES ${CHARLS_LIBRARY})
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SET(CHARLS_INCLUDE_DIRS ${CHARLS_INCLUDE_DIR})
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SET(CHARLS_FOUND "YES")
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ELSE (CHARLS_LIBRARY AND CHARLS_INCLUDE_DIR)
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SET(CHARLS_FOUND "NO")
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ENDIF (CHARLS_LIBRARY AND CHARLS_INCLUDE_DIR)
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IF (CHARLS_FOUND)
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IF (NOT CHARLS_FIND_QUIETLY)
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MESSAGE(STATUS "Found CHARLS: ${CHARLS_LIBRARIES}")
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ENDIF (NOT CHARLS_FIND_QUIETLY)
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ELSE (CHARLS_FOUND)
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IF (CHARLS_FIND_REQUIRED)
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MESSAGE(FATAL_ERROR "Could not find CHARLS library")
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ENDIF (CHARLS_FIND_REQUIRED)
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ENDIF (CHARLS_FOUND)
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MARK_AS_ADVANCED(
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CHARLS_LIBRARIES
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CHARLS_INCLUDE_DIR
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)
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--- CMakeLists.txt 2009-11-12 23:09:48.000000000 +0100
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+++ CMakeLists2.txt 2010-02-05 18:08:06.000000000 +0100
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@@ -38,10 +38,7 @@
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STRING(COMPARE EQUAL "${GDCM_SOURCE_DIR}" "${GDCM_BINARY_DIR}" INSOURCE)
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GET_FILENAME_COMPONENT(PARENTDIR ${GDCM_BINARY_DIR} PATH)
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STRING(COMPARE EQUAL "${GDCM_SOURCE_DIR}" "${PARENTDIR}" INSOURCESUBDIR)
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-IF(INSOURCE OR INSOURCESUBDIR)
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- MESSAGE(FATAL_ERROR "GDCM requires an out of source Build. "
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- "Please create a separate binary directory and run CMake there.")
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-ENDIF(INSOURCE OR INSOURCESUBDIR)
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+
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#-----------------------------------------------------------------------------
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SET(GDCM_MAJOR_VERSION 2)
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--- CMakeLists.txt 2010-02-19 19:18:30.000000000 +0100
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+++ CMakeLists2.txt 2010-02-19 19:21:51.000000000 +0100
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@@ -197,7 +197,7 @@
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IF(NOT GDCM_INSTALL_LIB_DIR)
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#SET(GDCM_INSTALL_LIB_DIR "lib/${PROJECT_NAME}")
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- SET(GDCM_INSTALL_LIB_DIR "lib")
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+ SET(GDCM_INSTALL_LIB_DIR "lib${LIB_SUFFIX}")
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ENDIF(NOT GDCM_INSTALL_LIB_DIR)
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IF(NOT GDCM_INSTALL_DATA_DIR)
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@@ -261,6 +261,11 @@
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OPTION(GDCM_USE_SYSTEM_EXPAT "Use system expat" OFF)
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OPTION(GDCM_USE_SYSTEM_LJPEG "Use system ljpeg (ijg lib)" OFF)
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OPTION(GDCM_USE_SYSTEM_OPENJPEG "Use system openjpeg (1.x)" OFF)
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+IF(GDCM_USE_JPEGLS)
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+ OPTION(GDCM_USE_SYSTEM_JPEGLS "Use system JPEGLS (CharLS)" OFF)
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+ MARK_AS_ADVANCED(GDCM_USE_SYSTEM_JPEGLS)
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+ENDIF(GDCM_USE_JPEGLS)
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+
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MARK_AS_ADVANCED(GDCM_USE_SYSTEM_ZLIB GDCM_USE_SYSTEM_UUID GDCM_USE_SYSTEM_EXPAT GDCM_USE_SYSTEM_OPENSSL)
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MARK_AS_ADVANCED(GDCM_USE_SYSTEM_OPENJPEG GDCM_USE_SYSTEM_LJPEG)
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OPTION(GDCM_USE_SYSTEM_POPPLER "Use system poppler (pdf)" OFF)
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@@ -283,6 +288,14 @@
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SET(GDCM_OPENJPEG_LIBRARIES gdcmopenjpeg)
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ENDIF(GDCM_USE_SYSTEM_OPENJPEG)
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+IF(GDCM_USE_SYSTEM_JPEGLS)
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+ FIND_PACKAGE(CharLS REQUIRED)
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+ SET(GDCM_CHARLS_LIBRARIES ${CHARLS_LIBRARIES})
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+ELSE(GDCM_USE_SYSTEM_JPEGLS)
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+ SET(GDCM_CHARLS_LIBRARIES gdcmcharls)
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+ENDIF(GDCM_USE_SYSTEM_JPEGLS)
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+
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+
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# Very advanced user option:
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# This will cause building of the broken JPEG library released by the Standford PVRG group:
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OPTION(GDCM_USE_PVRG "Use pvrg lib, only turn it on if you know what you are doing." OFF)
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--- Utilities/CMakeLists.txt 2009-11-12 23:09:48.000000000 +0100
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+++ Utilities/CMakeLists2.txt 2010-02-19 19:21:59.000000000 +0100
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@@ -35,12 +35,14 @@
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# Do jpegls (JPEG-LS aka near lossless implementation)
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APPEND_COPYRIGHT(${CMAKE_CURRENT_SOURCE_DIR}/gdcmcharls/License.txt)
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IF(GDCM_USE_JPEGLS)
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- SET(CHARLS_NAMESPACE "GDCMCHARLS")
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- SET(CHARLS_INSTALL_NO_LIBRARIES ${GDCM_INSTALL_NO_LIBRARIES})
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- SET(CHARLS_INSTALL_BIN_DIR ${GDCM_INSTALL_BIN_DIR})
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- SET(CHARLS_INSTALL_LIB_DIR ${GDCM_INSTALL_LIB_DIR})
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- SET(CHARLS_INSTALL_INCLUDE_DIR ${GDCM_INSTALL_INCLUDE_DIR})
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- SUBDIRS(gdcmcharls)
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+ IF(NOT GDCM_USE_SYSTEM_JPEGLS)
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+ SET(CHARLS_NAMESPACE "GDCMCHARLS")
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+ SET(CHARLS_INSTALL_NO_LIBRARIES ${GDCM_INSTALL_NO_LIBRARIES})
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+ SET(CHARLS_INSTALL_BIN_DIR ${GDCM_INSTALL_BIN_DIR})
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+ SET(CHARLS_INSTALL_LIB_DIR ${GDCM_INSTALL_LIB_DIR})
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+ SET(CHARLS_INSTALL_INCLUDE_DIR ${GDCM_INSTALL_INCLUDE_DIR})
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+ SUBDIRS(gdcmcharls)
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+ ENDIF(NOT GDCM_USE_SYSTEM_JPEGLS)
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ENDIF(GDCM_USE_JPEGLS)
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# Do md5
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--- Source/MediaStorageAndFileFormat/CMakeLists.txt 2009-11-12 23:09:48.000000000 +0100
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+++ Source/MediaStorageAndFileFormat/CMakeLists2.txt 2010-02-19 19:22:23.000000000 +0100
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@@ -132,7 +132,7 @@
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TARGET_LINK_LIBRARIES(gdcmMSFF gdcmIOD gdcmDSED gdcmDICT ${GDCM_LJPEG_LIBRARIES} ${GDCM_OPENJPEG_LIBRARIES})
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SET_TARGET_PROPERTIES(gdcmMSFF PROPERTIES ${GDCM_LIBRARY_PROPERTIES} LINK_INTERFACE_LIBRARIES "gdcmDSED;gdcmDICT;gdcmIOD")
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IF(GDCM_USE_JPEGLS)
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- TARGET_LINK_LIBRARIES(gdcmMSFF gdcmcharls)
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+ TARGET_LINK_LIBRARIES(gdcmMSFF ${GDCM_CHARLS_LIBRARIES})
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ENDIF(GDCM_USE_JPEGLS)
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IF(CMAKE_COMPILER_IS_GNUCXX AND MINGW)
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--- Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx 2009-11-12 23:09:48.000000000 +0100
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+++ Source/MediaStorageAndFileFormat/gdcmJPEGLSCodec2.cxx 2010-02-19 19:22:09.000000000 +0100
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@@ -18,6 +18,16 @@
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#include "gdcmDataElement.h"
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// CharLS includes
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+#ifdef GDCM_USE_SYSTEM_EXPAT
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+#include "CharLS/stdafx.h" // sigh...
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+#include "CharLS/interface.h"
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+#include "CharLS/util.h"
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+#include "CharLS/defaulttraits.h"
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+#include "CharLS/losslesstraits.h"
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+#include "CharLS/colortransform.h"
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+#include "CharLS/streams.h"
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+#include "CharLS/processline.h"
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+#else
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#include "gdcmcharls/stdafx.h" // sigh...
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#include "gdcmcharls/interface.h"
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#include "gdcmcharls/util.h"
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@@ -26,6 +36,8 @@
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#include "gdcmcharls/colortransform.h"
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#include "gdcmcharls/streams.h"
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#include "gdcmcharls/processline.h"
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+#endif
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+
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namespace gdcm
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--- CMake/UseCopyright.cmake 2009-11-12 23:09:48.000000000 +0100
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+++ CMake/UseCopyright2.cmake 2010-02-17 13:24:09.000000000 +0100
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@@ -18,8 +18,10 @@
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# need to raise an error if COPYRIGHT_MODULE_FILENAME is not set...
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IF(EXISTS ${COPYRIGHT_MODULE_FILENAME} )
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FOREACH(filename ${ARGN})
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- FILE(READ ${filename} content)
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- FILE(APPEND ${COPYRIGHT_MODULE_FILENAME} ${content})
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+ IF(EXISTS ${filename} )
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+ FILE(READ ${filename} content)
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+ FILE(APPEND ${COPYRIGHT_MODULE_FILENAME} ${content})
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+ ENDIF(EXISTS ${filename} )
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ENDFOREACH(filename)
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ENDIF(EXISTS ${COPYRIGHT_MODULE_FILENAME} )
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ENDMACRO(APPEND_COPYRIGHT)
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# we don't want to provide private python extension libs
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%{?filter_setup:
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%filter_provides_in %{python_sitearch}/.*\.so$
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%filter_setup
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}
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%if ! (0%{?fedora} > 12 || 0%{?rhel} > 5)
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%{!?python_sitelib: %global python_sitelib %(%{__python} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())")}
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%{!?python_sitearch: %global python_sitearch %(%{__python} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib(1))")}
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%endif
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Name: gdcm
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Version: 2.0.16
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Release: 5%{?dist}
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Summary: Grassroots DiCoM is a C++ library to parse DICOM medical files
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Group: Development/Libraries
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License: BSD
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URL: http://sourceforge.net/apps/mediawiki/gdcm/index.php?title=Main_Page
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Source0: http://download.sourceforge.net/project/gdcm/gdcm%202.x/GDCM%202.0.16/gdcm-2.0.16.tar.bz2
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#Source1: http://downloads.sourceforge.net/project/gdcm/gdcmData/gdcmData/gdcmData.tar.bz2
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Source2: FindCharLS.cmake
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Buildroot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
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# There is a bug in doxygen preventing compilation on:
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ExcludeArch: ppc ppc64
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Patch1: gdcm-2.0.14-inplacebuild.patch
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Patch2: gdcm-2.0.14-usecopyright.patch
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Patch3: gdcm-2.0.14-use_system_charls.patch
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BuildRequires: cmake >= 2.6.0
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BuildRequires: openssl-devel
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BuildRequires: libuuid-devel
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BuildRequires: expat-devel
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BuildRequires: openjpeg-devel
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BuildRequires: poppler-devel
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BuildRequires: mesa-libOSMesa-devel
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BuildRequires: fontconfig-devel
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BuildRequires: doxygen
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BuildRequires: CharLS-devel
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BuildRequires: texlive-latex
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BuildRequires: graphviz
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BuildRequires: python2-devel
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BuildRequires: swig
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%description
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GDCM implements the dicom base standard part 5 that concentrates on image file
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format. Hence GDCM supports the following formats:
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- ACR-NEMA version 1 and 2 (huffman compression is not supported),
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- DICOM version 3.0, including various encodings of JPEG - lossless & lossy-,
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RLE, J2K, deflated, JPEG-LS (very experimental) (MPEG2 compression is not
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supported)
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- Papyrus V2 and V3 file headers should be readable,
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%package devel
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Summary: Libraries and headers for GDCM
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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%description devel
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You should install the gdcm-devel package if you would like to
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compile applications based on gdcm
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%package python
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Summary: Python binding for GDCM
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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%description python
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You should install the gdcm-python package if you would like to
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used this library with python
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%prep
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%setup -q
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%patch1
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%patch2
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%patch3
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# Remove bundled utilities (we use Fedora's ones)
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rm -rf Utilities/gdcmexpat
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rm -rf Utilities/gdcmopenjpeg
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rm -rf Utilities/gdcmzlib
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rm -rf Utilities/gdcmuuid
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rm -rf Utilities/gdcmcharls
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# Remove bundled utilities (we don't use them)
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rm -rf Utilities/gdcmmd5
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rm -rf Utilities/getopt
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rm -rf Utilities/pvrg
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rm -rf Utilities/rle
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rm -rf Utilities/wxWidgets
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cp %{SOURCE2} CMake/
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%build
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%cmake -DCMAKE_VERBOSE_MAKEFILE=ON \
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-DCMAKE_SKIP_RPATH:BOOL=YES \
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-DGDCM_BUILD_TESTING=OFF \
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-DGDCM_BUILD_EXAMPLES:BOOL=ON \
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-DGDCM_DOCUMENTATION:BOOL=ON \
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-DGDCM_PDF_DOCUMENTATION:BOOL=ON \
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-DGDCM_WRAP_PYTHON:BOOL=ON \
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-DGDCM_WRAP_JAVA=OFF \
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-DGDCM_BUILD_SHARED_LIBS:BOOL=ON \
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-DGDCM_BUILD_APPLICATIONS:BOOL=ON \
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-DCMAKE_BUILD_TYPE:STRING="Release" \
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-DGDCM_USE_VTK:BOOL=OFF \
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-DGDCM_USE_SYSTEM_EXPAT=ON \
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-DGDCM_USE_SYSTEM_OPENJPEG=ON \
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-DGDCM_USE_SYSTEM_ZLIB=ON \
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-DGDCM_USE_SYSTEM_UUID=ON \
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-DGDCM_USE_SYSTEM_LJPEG=OFF \
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-DGDCM_USE_SYSTEM_OPENSSL=ON \
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-DGDCM_USE_JPEGLS=ON \
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-DGDCM_USE_SYSTEM_JPEGLS=ON \
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-DGDCM_USE_SYSTEM_POPPLER=ON .
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#Cannot build wrap_java:
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# -DGDCM_VTK_JAVA_JAR:PATH=/usr/share/java/vtk.jar no found!
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# yum provides */vtk.jar -> No results found
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make %{?_smp_mflags}
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%install
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rm -rf $RPM_BUILD_ROOT
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make install DESTDIR=$RPM_BUILD_ROOT
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install -d $RPM_BUILD_ROOT%{python_sitelib}/
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mv $RPM_BUILD_ROOT%{_libdir}/gdcm.py $RPM_BUILD_ROOT%{python_sitelib}/
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mv $RPM_BUILD_ROOT%{_libdir}/gdcmswig.py $RPM_BUILD_ROOT%{python_sitelib}/
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mv $RPM_BUILD_ROOT%{_libdir}/_gdcmswig.so $RPM_BUILD_ROOT%{python_sitelib}/
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## Rearranging directory layout and removing version from dir
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mv $RPM_BUILD_ROOT%{_datadir}/gdcm-2.0 $RPM_BUILD_ROOT%{_datadir}/gdcm
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mv $RPM_BUILD_ROOT%{_libdir}/gdcm-2.0/*.cmake $RPM_BUILD_ROOT%{_datadir}/gdcm/
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rmdir $RPM_BUILD_ROOT%{_libdir}/gdcm-2.0/
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mv $RPM_BUILD_ROOT%{_includedir}/gdcm-2.0 $RPM_BUILD_ROOT%{_includedir}/gdcm
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## Cleaning Example dir from cmake cache files + remove 0-lenght files
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find %{_builddir}/%{?buildsubdir}/Examples -depth -name CMakeFiles | xargs rm -rf
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find %{_builddir}/%{?buildsubdir}/Examples -depth -size 0 | xargs rm -rf
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%clean
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rm -rf $RPM_BUILD_ROOT
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%files
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%defattr(-,root,root,-)
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||||||
|
%doc %{_mandir}/man1/*.1*
|
||||||
|
%doc AUTHORS Copyright.txt README.Copyright.txt README.txt
|
||||||
|
%dir %{_datadir}/gdcm/
|
||||||
|
%{_bindir}/*
|
||||||
|
%{_libdir}/*.so.*
|
||||||
|
%{_datadir}/gdcm/XML
|
||||||
|
|
||||||
|
%check
|
||||||
|
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$(pwd)/bin
|
||||||
|
ctest .
|
||||||
|
|
||||||
|
%post -p /sbin/ldconfig
|
||||||
|
|
||||||
|
%postun -p /sbin/ldconfig
|
||||||
|
|
||||||
|
%files devel
|
||||||
|
%defattr(-,root,root)
|
||||||
|
%dir %{_includedir}/gdcm/
|
||||||
|
%doc Examples
|
||||||
|
%{_includedir}/gdcm/*
|
||||||
|
%{_libdir}/*.so
|
||||||
|
%{_datadir}/gdcm/*.cmake
|
||||||
|
|
||||||
|
%files python
|
||||||
|
%defattr(-,root,root,-)
|
||||||
|
%{python_sitelib}/*
|
||||||
|
|
||||||
|
%changelog
|
||||||
|
* Tue Oct 19 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.16-5
|
||||||
|
- Filtered out private python extension lib
|
||||||
|
- Added documentation
|
||||||
|
|
||||||
|
* Tue Oct 19 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.16-4
|
||||||
|
- Changed directory ownership
|
||||||
|
|
||||||
|
* Fri Oct 15 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.16-3
|
||||||
|
- Rearranged directory layout to remove version in dir names
|
||||||
|
|
||||||
|
* Sat Sep 18 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.16-2
|
||||||
|
- Added ExcludeArch for ppc and ppc64 because of a bug in doxygen
|
||||||
|
see https://bugzilla.redhat.com/show_bug.cgi?id=566725#c9
|
||||||
|
|
||||||
|
* Sat Sep 18 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.16-1
|
||||||
|
- Updated to release 2.0.16
|
||||||
|
- Removed patch "stack_namespace" and "poppler_breaks_api" because
|
||||||
|
already included upstream
|
||||||
|
- Added swig and texlive-pdflatex to BuildRequires
|
||||||
|
- Moved python files to a separate package
|
||||||
|
|
||||||
|
* Sun Apr 11 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.14-5
|
||||||
|
- Fixed some issues pointed out by Martin Gieseking. In details:
|
||||||
|
- BR to build documentation (tex + graphviz)
|
||||||
|
- Changed man page inclusion
|
||||||
|
- Fixed changelog format
|
||||||
|
- Removed VTK support because cmake 2.8 is needed to recognize vtk 5.4!
|
||||||
|
- Fixed python support
|
||||||
|
|
||||||
|
* Thu Mar 25 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.14-4
|
||||||
|
- Added VTK support
|
||||||
|
- Added python support
|
||||||
|
|
||||||
|
* Mon Mar 21 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.14-3
|
||||||
|
- Added BuildRequires fontconfig-devel
|
||||||
|
- Fixed lib /lib64 issue with base CMakeLists.txt
|
||||||
|
|
||||||
|
* Mon Mar 15 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.14-2
|
||||||
|
- Added BuildRequires CharLS-devel
|
||||||
|
|
||||||
|
* Wed Feb 17 2010 Mario Ceresa <mrceresa@gmail.com> 2.0.14
|
||||||
|
- Initial RPM Release
|
||||||
|
|
||||||
Loading…
Reference in new issue