From 076eae73b583b8de08a78a456dfbe19f26f1a4fe Mon Sep 17 00:00:00 2001 From: tigro Date: Sun, 5 Jan 2025 21:09:32 +0300 Subject: [PATCH] import python-zarr-2.16.1-5.el10 --- .gitignore | 1 + .python-zarr.metadata | 1 + ...ests-for-changes-in-fsspec-1819-1679.patch | 43 ++ ...le-different-hexdigests-from-zlib-ng.patch | 675 ++++++++++++++++++ SPECS/python-zarr.spec | 253 +++++++ 5 files changed, 973 insertions(+) create mode 100644 .gitignore create mode 100644 .python-zarr.metadata create mode 100644 SOURCES/0001-Adapt-storage-tests-for-changes-in-fsspec-1819-1679.patch create mode 100644 SOURCES/0001-array-tests-handle-different-hexdigests-from-zlib-ng.patch create mode 100644 SPECS/python-zarr.spec diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..5eb57cd --- /dev/null +++ b/.gitignore @@ -0,0 +1 @@ +SOURCES/zarr-2.16.1.tar.gz diff --git a/.python-zarr.metadata b/.python-zarr.metadata new file mode 100644 index 0000000..43f1836 --- /dev/null +++ b/.python-zarr.metadata @@ -0,0 +1 @@ +c7c2a9156e3918cc80c50a1903f7ab9dc7546c89 SOURCES/zarr-2.16.1.tar.gz diff --git a/SOURCES/0001-Adapt-storage-tests-for-changes-in-fsspec-1819-1679.patch b/SOURCES/0001-Adapt-storage-tests-for-changes-in-fsspec-1819-1679.patch new file mode 100644 index 0000000..232febf --- /dev/null +++ b/SOURCES/0001-Adapt-storage-tests-for-changes-in-fsspec-1819-1679.patch @@ -0,0 +1,43 @@ +From 81707e55abc269ba01675ff5f3e4c16e158c021e Mon Sep 17 00:00:00 2001 +From: Adam Williamson +Date: Mon, 17 Jun 2024 10:36:38 -0700 +Subject: [PATCH] Adapt storage tests for changes in fsspec (#1819) (#1679) + +This is adapted from the fixes that were rolled into +https://github.com/zarr-developers/zarr-python/pull/1785 for the +v3 branch. + +Signed-off-by: Adam Williamson +--- + zarr/tests/test_storage.py | 7 ++++--- + 1 file changed, 4 insertions(+), 3 deletions(-) + +diff --git a/zarr/tests/test_storage.py b/zarr/tests/test_storage.py +index da690f59..99af2f19 100644 +--- a/zarr/tests/test_storage.py ++++ b/zarr/tests/test_storage.py +@@ -406,7 +406,9 @@ class StoreTests: + assert [] == store.listdir(self.root + "c/x/y") + assert [] == store.listdir(self.root + "c/d/y") + assert [] == store.listdir(self.root + "c/d/y/z") +- assert [] == store.listdir(self.root + "c/e/f") ++ # https://github.com/zarr-developers/zarr-python/issues/1819 and #1679 ++ # fsspec changed from returning [] to returning ["f"] around 2024.3 ++ assert store.listdir(self.root + "c/e/f") in ([], ["f"]) + + # test rename (optional) + if store.is_erasable(): +@@ -1152,9 +1154,8 @@ class TestFSStore(StoreTests): + store[self.root + "foo"] = b"hello" + assert "foo" in os.listdir(str(path1) + "/" + self.root) + assert self.root + "foo" in store +- assert not os.listdir(str(path2)) +- assert store[self.root + "foo"] == b"hello" + assert "foo" in os.listdir(str(path2)) ++ assert store[self.root + "foo"] == b"hello" + + def test_deep_ndim(self): + import zarr +-- +2.45.2 + diff --git a/SOURCES/0001-array-tests-handle-different-hexdigests-from-zlib-ng.patch b/SOURCES/0001-array-tests-handle-different-hexdigests-from-zlib-ng.patch new file mode 100644 index 0000000..2024aa1 --- /dev/null +++ b/SOURCES/0001-array-tests-handle-different-hexdigests-from-zlib-ng.patch @@ -0,0 +1,675 @@ +From 13e0fc90d394d10abf44399cb1675b04fed18814 Mon Sep 17 00:00:00 2001 +From: Adam Williamson +Date: Mon, 17 Jun 2024 11:25:08 -0700 +Subject: [PATCH] array tests: handle different hexdigests from zlib-ng (#1678) + +As explained in the issue, zlib-ng produces different hex digests +from original zlib. This adjusts the tests slightly to allow for +this. + +Signed-off-by: Adam Williamson +--- + zarr/tests/test_core.py | 458 ++++++++++++++++++++++++---------------- + 1 file changed, 274 insertions(+), 184 deletions(-) + +diff --git a/zarr/tests/test_core.py b/zarr/tests/test_core.py +index 77b9415d..861aeefc 100644 +--- a/zarr/tests/test_core.py ++++ b/zarr/tests/test_core.py +@@ -619,13 +619,25 @@ class TestArray: + def expected(self): + # tests for array without path will not be run for v3 stores + assert self.version == 2 +- return [ +- "063b02ff8d9d3bab6da932ad5828b506ef0a6578", +- "f97b84dc9ffac807415f750100108764e837bb82", +- "c7190ad2bea1e9d2e73eaa2d3ca9187be1ead261", +- "14470724dca6c1837edddedc490571b6a7f270bc", +- "2a1046dd99b914459b3e86be9dde05027a07d209", +- ] ++ return ( ++ # zlib ++ [ ++ "063b02ff8d9d3bab6da932ad5828b506ef0a6578", ++ "f97b84dc9ffac807415f750100108764e837bb82", ++ "c7190ad2bea1e9d2e73eaa2d3ca9187be1ead261", ++ "14470724dca6c1837edddedc490571b6a7f270bc", ++ "2a1046dd99b914459b3e86be9dde05027a07d209", ++ ], ++ # zlib-ng ++ [ ++ "063b02ff8d9d3bab6da932ad5828b506ef0a6578", ++ "f97b84dc9ffac807415f750100108764e837bb82", ++ "c7190ad2bea1e9d2e73eaa2d3ca9187be1ead261", ++ "f3f04f0e30844739d34ef8a9eee6c949a47840b8", ++ "2a1046dd99b914459b3e86be9dde05027a07d209", ++ ], ++ ) ++ + + def test_hexdigest(self): + found = [] +@@ -664,7 +676,7 @@ class TestArray: + found.append(z.hexdigest()) + z.store.close() + +- assert self.expected() == found ++ assert found in self.expected() + + def test_resize_1d(self): + +@@ -1622,13 +1634,15 @@ class TestArrayWithPath(TestArray): + pass + + def expected(self): +- return [ +- "f710da18d45d38d4aaf2afd7fb822fdd73d02957", +- "1437428e69754b1e1a38bd7fc9e43669577620db", +- "6c530b6b9d73e108cc5ee7b6be3d552cc994bdbe", +- "4c0a76fb1222498e09dcd92f7f9221d6cea8b40e", +- "05b0663ffe1785f38d3a459dec17e57a18f254af", +- ] ++ return ( ++ [ ++ "f710da18d45d38d4aaf2afd7fb822fdd73d02957", ++ "1437428e69754b1e1a38bd7fc9e43669577620db", ++ "6c530b6b9d73e108cc5ee7b6be3d552cc994bdbe", ++ "4c0a76fb1222498e09dcd92f7f9221d6cea8b40e", ++ "05b0663ffe1785f38d3a459dec17e57a18f254af", ++ ], ++ ) + + def test_nbytes_stored(self): + +@@ -1656,13 +1670,15 @@ class TestArrayWithChunkStore(TestArray): + return KVStore(dict()) + + def expected(self): +- return [ +- "f710da18d45d38d4aaf2afd7fb822fdd73d02957", +- "1437428e69754b1e1a38bd7fc9e43669577620db", +- "6c530b6b9d73e108cc5ee7b6be3d552cc994bdbe", +- "4c0a76fb1222498e09dcd92f7f9221d6cea8b40e", +- "05b0663ffe1785f38d3a459dec17e57a18f254af", +- ] ++ return ( ++ [ ++ "f710da18d45d38d4aaf2afd7fb822fdd73d02957", ++ "1437428e69754b1e1a38bd7fc9e43669577620db", ++ "6c530b6b9d73e108cc5ee7b6be3d552cc994bdbe", ++ "4c0a76fb1222498e09dcd92f7f9221d6cea8b40e", ++ "05b0663ffe1785f38d3a459dec17e57a18f254af", ++ ], ++ ) + + def test_nbytes_stored(self): + +@@ -1734,13 +1750,24 @@ class TestArrayWithNestedDirectoryStore(TestArrayWithDirectoryStore): + return store + + def expected(self): +- return [ +- "d174aa384e660eb51c6061fc8d20850c1159141f", +- "125f00eea40032f16016b292f6767aa3928c00a7", +- "1b52ead0ed889a781ebd4db077a29e35d513c1f3", +- "719a88b34e362ff65df30e8f8810c1146ab72bc1", +- "6e0abf30daf45de51593c227fb907759ca725551", +- ] ++ return ( ++ # zlib ++ [ ++ "d174aa384e660eb51c6061fc8d20850c1159141f", ++ "125f00eea40032f16016b292f6767aa3928c00a7", ++ "1b52ead0ed889a781ebd4db077a29e35d513c1f3", ++ "719a88b34e362ff65df30e8f8810c1146ab72bc1", ++ "6e0abf30daf45de51593c227fb907759ca725551", ++ ], ++ # zlib-ng ++ [ ++ "d174aa384e660eb51c6061fc8d20850c1159141f", ++ "125f00eea40032f16016b292f6767aa3928c00a7", ++ "1b52ead0ed889a781ebd4db077a29e35d513c1f3", ++ "42d9c96e60ed22346c4671bc5bec32a2078ce25c", ++ "6e0abf30daf45de51593c227fb907759ca725551", ++ ], ++ ) + + + class TestArrayWithN5Store(TestArrayWithDirectoryStore): +@@ -2028,13 +2055,24 @@ class TestArrayWithN5Store(TestArrayWithDirectoryStore): + assert np.all(a2[:] == 1) + + def expected(self): +- return [ +- "8811a77d54caaa1901d5cc4452d946ae433c8d90", +- "d880b007d9779db5f2cdbe13274eb1cbac4a425a", +- "d80eb66d5521744f051e816ab368d8ccfc2e3edf", +- "568f9f837e4b682a3819cb122988e2eebeb6572b", +- "4fdf4475d786d6694110db5619acd30c80dfc372", +- ] ++ return ( ++ # zlib ++ [ ++ "8811a77d54caaa1901d5cc4452d946ae433c8d90", ++ "d880b007d9779db5f2cdbe13274eb1cbac4a425a", ++ "d80eb66d5521744f051e816ab368d8ccfc2e3edf", ++ "568f9f837e4b682a3819cb122988e2eebeb6572b", ++ "4fdf4475d786d6694110db5619acd30c80dfc372", ++ ], ++ # zlib-ng ++ [ ++ "8811a77d54caaa1901d5cc4452d946ae433c8d90", ++ "d880b007d9779db5f2cdbe13274eb1cbac4a425a", ++ "d80eb66d5521744f051e816ab368d8ccfc2e3edf", ++ "ea7d9e80211679291141840b111775b088e51480", ++ "4fdf4475d786d6694110db5619acd30c80dfc372", ++ ], ++ ) + + + @pytest.mark.skipif(have_fsspec is False, reason="needs fsspec") +@@ -2112,13 +2150,15 @@ class TestArrayWithNoCompressor(TestArray): + compressor = None + + def expected(self): +- return [ +- "d3da3d485de4a5fcc6d91f9dfc6a7cba9720c561", +- "443b8dee512e42946cb63ff01d28e9bee8105a5f", +- "b75eb90f68aa8ee1e29f2c542e851d3945066c54", +- "42b6ae0d50ec361628736ab7e68fe5fefca22136", +- "a0535f31c130f5e5ac66ba0713d1c1ceaebd089b", +- ] ++ return ( ++ [ ++ "d3da3d485de4a5fcc6d91f9dfc6a7cba9720c561", ++ "443b8dee512e42946cb63ff01d28e9bee8105a5f", ++ "b75eb90f68aa8ee1e29f2c542e851d3945066c54", ++ "42b6ae0d50ec361628736ab7e68fe5fefca22136", ++ "a0535f31c130f5e5ac66ba0713d1c1ceaebd089b", ++ ], ++ ) + + + class TestArrayWithBZ2Compressor(TestArray): +@@ -2126,13 +2166,15 @@ class TestArrayWithBZ2Compressor(TestArray): + compressor = BZ2(level=1) + + def expected(self): +- return [ +- "33141032439fb1df5e24ad9891a7d845b6c668c8", +- "44d719da065c88a412d609a5500ff41e07b331d6", +- "37c7c46e5730bba37da5e518c9d75f0d774c5098", +- "1e1bcaac63e4ef3c4a68f11672537131c627f168", +- "86d7b9bf22dccbeaa22f340f38be506b55e76ff2", +- ] ++ return ( ++ [ ++ "33141032439fb1df5e24ad9891a7d845b6c668c8", ++ "44d719da065c88a412d609a5500ff41e07b331d6", ++ "37c7c46e5730bba37da5e518c9d75f0d774c5098", ++ "1e1bcaac63e4ef3c4a68f11672537131c627f168", ++ "86d7b9bf22dccbeaa22f340f38be506b55e76ff2", ++ ], ++ ) + + + class TestArrayWithBloscCompressor(TestArray): +@@ -2140,13 +2182,15 @@ class TestArrayWithBloscCompressor(TestArray): + compressor = Blosc(cname="zstd", clevel=1, shuffle=1) + + def expected(self): +- return [ +- "7ff2ae8511eac915fad311647c168ccfe943e788", +- "962705c861863495e9ccb7be7735907aa15e85b5", +- "74ed339cfe84d544ac023d085ea0cd6a63f56c4b", +- "90e30bdab745a9641cd0eb605356f531bc8ec1c3", +- "95d40c391f167db8b1290e3c39d9bf741edacdf6", +- ] ++ return ( ++ [ ++ "7ff2ae8511eac915fad311647c168ccfe943e788", ++ "962705c861863495e9ccb7be7735907aa15e85b5", ++ "74ed339cfe84d544ac023d085ea0cd6a63f56c4b", ++ "90e30bdab745a9641cd0eb605356f531bc8ec1c3", ++ "95d40c391f167db8b1290e3c39d9bf741edacdf6", ++ ], ++ ) + + + try: +@@ -2161,13 +2205,15 @@ class TestArrayWithLZMACompressor(TestArray): + compressor = LZMA(preset=1) + + def expected(self): +- return [ +- "93ecaa530a1162a9d48a3c1dcee4586ccfc59bae", +- "04a9755a0cd638683531b7816c7fa4fbb6f577f2", +- "9de97b5c49b38e68583ed701d7e8f4c94b6a8406", +- "cde499f3dc945b4e97197ff8e3cf8188a1262c35", +- "e2cf3afbf66ad0e28a2b6b68b1b07817c69aaee2", +- ] ++ return ( ++ [ ++ "93ecaa530a1162a9d48a3c1dcee4586ccfc59bae", ++ "04a9755a0cd638683531b7816c7fa4fbb6f577f2", ++ "9de97b5c49b38e68583ed701d7e8f4c94b6a8406", ++ "cde499f3dc945b4e97197ff8e3cf8188a1262c35", ++ "e2cf3afbf66ad0e28a2b6b68b1b07817c69aaee2", ++ ], ++ ) + + + class TestArrayWithFilters(TestArray): +@@ -2181,13 +2227,24 @@ class TestArrayWithFilters(TestArray): + ) + + def expected(self): +- return [ +- "b80367c5599d47110d42bd8886240c2f46620dba", +- "95a7b2471225e73199c9716d21e8d3dd6e5f6f2a", +- "7300f1eb130cff5891630038fd99c28ef23d3a01", +- "c649ad229bc5720258b934ea958570c2f354c2eb", +- "62fc9236d78af18a5ec26c12eea1d33bce52501e", +- ] ++ return ( ++ # zlib ++ [ ++ "b80367c5599d47110d42bd8886240c2f46620dba", ++ "95a7b2471225e73199c9716d21e8d3dd6e5f6f2a", ++ "7300f1eb130cff5891630038fd99c28ef23d3a01", ++ "c649ad229bc5720258b934ea958570c2f354c2eb", ++ "62fc9236d78af18a5ec26c12eea1d33bce52501e", ++ ], ++ # zlib-ng ++ [ ++ "b80367c5599d47110d42bd8886240c2f46620dba", ++ "95a7b2471225e73199c9716d21e8d3dd6e5f6f2a", ++ "7300f1eb130cff5891630038fd99c28ef23d3a01", ++ "1e053b6ad7dc58de7b1f5dad7fb45851f6b7b3ee", ++ "62fc9236d78af18a5ec26c12eea1d33bce52501e", ++ ], ++ ) + + def test_astype_no_filters(self): + shape = (100,) +@@ -2312,7 +2369,8 @@ class TestArrayWithCustomMapping(TestArray): + z = self.create_array(shape=1000, chunks=100) + assert 245 == z.nbytes_stored + z[:] = 42 +- assert 515 == z.nbytes_stored ++ # 515 is zlib, 485 is zlib-ng ++ assert z.nbytes_stored in (515, 485) + + + class TestArrayNoCache(TestArray): +@@ -2407,13 +2465,15 @@ class TestArrayWithFSStore(TestArray): + return store + + def expected(self): +- return [ +- "ab753fc81df0878589535ca9bad2816ba88d91bc", +- "c16261446f9436b1e9f962e57ce3e8f6074abe8a", +- "c2ef3b2fb2bc9dcace99cd6dad1a7b66cc1ea058", +- "6e52f95ac15b164a8e96843a230fcee0e610729b", +- "091fa99bc60706095c9ce30b56ce2503e0223f56", +- ] ++ return ( ++ [ ++ "ab753fc81df0878589535ca9bad2816ba88d91bc", ++ "c16261446f9436b1e9f962e57ce3e8f6074abe8a", ++ "c2ef3b2fb2bc9dcace99cd6dad1a7b66cc1ea058", ++ "6e52f95ac15b164a8e96843a230fcee0e610729b", ++ "091fa99bc60706095c9ce30b56ce2503e0223f56", ++ ], ++ ) + + + @pytest.mark.skipif(have_fsspec is False, reason="needs fsspec") +@@ -2439,13 +2499,15 @@ class TestArrayWithFSStoreFromFilesystem(TestArray): + return store + + def expected(self): +- return [ +- "ab753fc81df0878589535ca9bad2816ba88d91bc", +- "c16261446f9436b1e9f962e57ce3e8f6074abe8a", +- "c2ef3b2fb2bc9dcace99cd6dad1a7b66cc1ea058", +- "6e52f95ac15b164a8e96843a230fcee0e610729b", +- "091fa99bc60706095c9ce30b56ce2503e0223f56", +- ] ++ return ( ++ [ ++ "ab753fc81df0878589535ca9bad2816ba88d91bc", ++ "c16261446f9436b1e9f962e57ce3e8f6074abe8a", ++ "c2ef3b2fb2bc9dcace99cd6dad1a7b66cc1ea058", ++ "6e52f95ac15b164a8e96843a230fcee0e610729b", ++ "091fa99bc60706095c9ce30b56ce2503e0223f56", ++ ], ++ ) + + + @pytest.mark.skipif(have_fsspec is False, reason="needs fsspec") +@@ -2460,13 +2522,15 @@ class TestArrayWithFSStorePartialRead(TestArray): + return store + + def expected(self): +- return [ +- "dd7577d645c38767cf6f6d1ef8fd64002883a014", +- "aa0de9892cf1ed3cda529efbf3233720b84489b7", +- "e6191c44cf958576c29c41cef0f55b028a4dbdff", +- "88adeeabb819feecccadf50152293dbb42f9107e", +- "1426e084427f9920e29c9ec81b663d1005849455", +- ] ++ return ( ++ [ ++ "dd7577d645c38767cf6f6d1ef8fd64002883a014", ++ "aa0de9892cf1ed3cda529efbf3233720b84489b7", ++ "e6191c44cf958576c29c41cef0f55b028a4dbdff", ++ "88adeeabb819feecccadf50152293dbb42f9107e", ++ "1426e084427f9920e29c9ec81b663d1005849455", ++ ], ++ ) + + def test_non_cont(self): + z = 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Elliott Sales de Andrade - 2.10.1-1 +- Update to latest version (#2009232) + +* Sat Sep 04 2021 Elliott Sales de Andrade - 2.9.5-1 +- Update to latest version (#1999283) + +* Fri Aug 27 2021 Elliott Sales de Andrade - 2.9.3-1 +- Update to latest version (#1998048) + +* Wed Aug 25 2021 Elliott Sales de Andrade - 2.9.2-1 +- Update to latest version (#1996553) + +* Mon Aug 23 2021 Elliott Sales de Andrade - 2.8.3-6 +- Switch to latest Python macros. + +* Sun Aug 01 2021 Elliott Sales de Andrade - 2.8.3-3 +- Fix build with Sphinx 4 +- Closes rhbz#1977650 + +* Fri Jul 23 2021 Fedora Release Engineering - 2.8.3-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild + +* Fri Jun 04 2021 Python Maint - 2.8.3-2 +- Rebuilt for Python 3.10 + +* Fri May 21 2021 Elliott Sales de Andrade - 2.8.3-1 +- Update to latest version (#1962736) + +* Thu May 20 2021 Elliott Sales de Andrade - 2.8.2-1 +- Update to latest version (#1962054) + +* Tue Apr 27 2021 Elliott Sales de Andrade - 2.8.1-1 +- Update to latest version + +* Sun Apr 25 2021 Elliott Sales de Andrade - 2.8.0-1 +- Update to latest version (#1953163) + +* Fri Apr 16 2021 Elliott Sales de Andrade - 2.7.1-1 +- Update to latest version (#1950334) + +* Sun Apr 04 2021 Elliott Sales de Andrade - 2.7.0-1 +- Update to latest version (#1942910) + +* Wed Jan 27 2021 Fedora Release Engineering - 2.6.1-2 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild + +* Sat Dec 12 2020 Elliott Sales de Andrade - 2.6.1-1 +- Update to latest version (#1903794) + +* Sat Oct 10 2020 Elliott Sales de Andrade - 2.5.0-1 +- Update to latest version (#1885678) + +* Wed Jul 29 2020 Fedora Release Engineering - 2.4.0-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild + +* Tue May 26 2020 Miro Hrončok - 2.4.0-2 +- Rebuilt for Python 3.9 + +* Tue Jan 28 2020 Elliott Sales de Andrade - 2.4.0-1 +- Update to latest version + +* Thu Oct 03 2019 Miro Hrončok - 2.3.2-5 +- Rebuilt for Python 3.8.0rc1 (#1748018) + +* Mon Aug 19 2019 Miro Hrončok - 2.3.2-4 +- Rebuilt for Python 3.8 + +* Fri Jul 26 2019 Fedora Release Engineering - 2.3.2-3 +- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild + +* Wed Jun 05 2019 Elliott Sales de Andrade - 2.3.2-2 +- Fix tests on 32-bit arches + +* Thu May 30 2019 Elliott Sales de Andrade - 2.3.2-1 +- Update to latest version + +* Tue Apr 02 2019 Elliott Sales de Andrade - 2.3.1-2 +- Fix tests on big-endian arches + +* Mon Apr 01 2019 Elliott Sales de Andrade - 2.3.1-1 +- Update to latest version + +* Mon Mar 18 2019 Elliott Sales de Andrade - 2.2.0-2 +- Fix test running +- Make doc subpackage noarch + +* Sat Mar 16 2019 Elliott Sales de Andrade - 2.2.0-1 +- Initial package. + +## END: Generated by rpmautospec