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491 lines
15 KiB
491 lines
15 KiB
3 years ago
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# Optional name suffix to use...we leave it off when compiling with gcc, but
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# for other compiled versions to install side by side, it will need a
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# suffix in order to keep the names from conflicting.
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#global _cc_name_suffix -gcc
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%global macrosdir %(d=%{_rpmconfigdir}/macros.d; [ -d $d ] || d=%{_sysconfdir}/rpm; echo $d)
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%if 0%{?fedora} >= 32 || 0%{?rhel} >= 8
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%bcond_with python2
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%else
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%bcond_without python2
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%endif
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%ifarch aarch64 ppc64le x86_64
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%bcond_without ucx
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%else
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%bcond_with ucx
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%endif
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# ARM 32-bit is not supported by rdma
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# https://bugzilla.redhat.com/show_bug.cgi?id=1780584
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%ifarch %{arm}
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%bcond_with rdma
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%else
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%bcond_without rdma
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%endif
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# Run autogen - needed for some patches
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%bcond_without autogen
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Name: openmpi%{?_cc_name_suffix}
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Version: 4.1.1
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Release: 3%{?dist}
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Summary: Open Message Passing Interface
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License: BSD and MIT and Romio
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URL: http://www.open-mpi.org/
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Epoch: 1
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# We can't use %%{name} here because of _cc_name_suffix
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Source0: https://www.open-mpi.org/software/ompi/v4.1/downloads/openmpi-%{version}.tar.bz2
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Source1: openmpi.module.in
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Source2: openmpi.pth.py2
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Source3: openmpi.pth.py3
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Source4: macros.openmpi
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Patch1: 266189935aef4fce825d0db831b4b53accc62c32.patch
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Patch2: 0001-Revert-ucx-check-supported-transports-and-devices-fo.patch
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BuildRequires: gcc-c++
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BuildRequires: gcc-gfortran
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BuildRequires: make
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%if %{with autogen}
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BuildRequires: libtool
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BuildRequires: perl(Data::Dumper)
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BuildRequires: perl(File::Find)
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%endif
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BuildRequires: valgrind-devel
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%if %{with rdma}
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BuildRequires: opensm-devel > 3.3.0
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BuildRequires: rdma-core-devel
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%endif
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# Doesn't compile:
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# vt_dyn.cc:958:28: error: 'class BPatch_basicBlockLoop' has no member named 'getLoopHead'
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# loop->getLoopHead()->getStartAddress(), loop_stmts );
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#BuildRequires: dyninst-devel
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BuildRequires: hwloc-devel >= 2.2.0
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# So configure can find lstopo
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BuildRequires: hwloc-gui
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BuildRequires: java-devel
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# Old libevent causes issues
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%if !0%{?el7}
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BuildRequires: libevent-devel
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%endif
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BuildRequires: libfabric-devel
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%ifnarch s390 s390x
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BuildRequires: papi-devel
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%endif
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BuildRequires: perl-generators
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BuildRequires: perl-interpreter
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BuildRequires: perl(Getopt::Long)
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BuildRequires: pmix-devel
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BuildRequires: python%{python3_pkgversion}-devel
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%ifarch x86_64
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BuildRequires: libpsm2-devel
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%endif
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%if %{with ucx}
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BuildRequires: ucx-devel
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%endif
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BuildRequires: zlib-devel
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%if !0%{?el7}
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BuildRequires: rpm-mpi-hooks
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%endif
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Provides: mpi
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%if 0%{?rhel} == 7
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# Need this for /etc/profile.d/modules.sh
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Requires: environment-modules
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%endif
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Requires: environment(modules)
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# openmpi currently requires ssh to run
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# https://svn.open-mpi.org/trac/ompi/ticket/4228
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Requires: openssh-clients
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# Private openmpi libraries
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%global __provides_exclude_from %{_libdir}/openmpi/lib/(lib(mca|ompi|open-(pal|rte|trace))|openmpi/).*.so
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%global __requires_exclude lib(mca|ompi|open-(pal|rte|trace)|vt).*
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%description
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Open MPI is an open source, freely available implementation of both the
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MPI-1 and MPI-2 standards, combining technologies and resources from
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several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in
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order to build the best MPI library available. A completely new MPI-2
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compliant implementation, Open MPI offers advantages for system and
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software vendors, application developers, and computer science
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researchers. For more information, see http://www.open-mpi.org/ .
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%package devel
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Summary: Development files for openmpi
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Requires: %{name} = %{epoch}:%{version}-%{release}, gcc-gfortran
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Provides: mpi-devel
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%if !0%{?el7}
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Requires: rpm-mpi-hooks
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# Make sure this package is rebuilt with correct Python version when updating
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# Otherwise mpi.req from rpm-mpi-hooks doesn't work
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# https://bugzilla.redhat.com/show_bug.cgi?id=1705296
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Requires: (python(abi) = %{python3_version} if python3)
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%endif
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%description devel
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Contains development headers and libraries for openmpi.
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%package java
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Summary: Java library
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Requires: %{name} = %{epoch}:%{version}-%{release}
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Requires: java-headless
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%description java
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Java library.
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%package java-devel
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Summary: Java development files for openmpi
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Requires: %{name}-java = %{epoch}:%{version}-%{release}
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Requires: java-devel
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%description java-devel
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Contains development wrapper for compiling Java with openmpi.
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# We set this to for convenience, since this is the unique dir we use for this
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# particular package, version, compiler
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%global namearch openmpi-%{_arch}%{?_cc_name_suffix}
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%if %{with python2}
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%package -n python2-openmpi
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Summary: OpenMPI support for Python 2
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BuildRequires: python2-devel
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Requires: %{name} = %{epoch}:%{version}-%{release}
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Requires: python(abi) = %{python2_version}
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%description -n python2-openmpi
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OpenMPI support for Python 2.
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%endif
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%package -n python%{python3_pkgversion}-openmpi
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Summary: OpenMPI support for Python 3
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Requires: %{name} = %{epoch}:%{version}-%{release}
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Requires: python(abi) = %{python3_version}
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%description -n python%{python3_pkgversion}-openmpi
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OpenMPI support for Python 3.
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%prep
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%autosetup -p1 -n %{name}-%{version}
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%if %{with autogen}
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./autogen.pl --force
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%endif
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%build
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%set_build_flags
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./configure --prefix=%{_libdir}/%{name} \
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--mandir=%{_mandir}/%{namearch} \
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--includedir=%{_includedir}/%{namearch} \
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--sysconfdir=%{_sysconfdir}/%{namearch} \
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--disable-silent-rules \
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--enable-builtin-atomics \
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--enable-mpi-cxx \
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--enable-mpi-java \
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--enable-mpi1-compatibility \
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--with-sge \
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--with-valgrind \
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--enable-memchecker \
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--with-hwloc=/usr \
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%if !0%{?el7}
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--with-libevent=external \
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--with-pmix=external \
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%endif
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%make_build V=1
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%install
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%make_install
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find %{buildroot}%{_libdir}/%{name}/lib -name \*.la | xargs rm
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find %{buildroot}%{_mandir}/%{namearch} -type f | xargs gzip -9
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ln -s mpicc.1.gz %{buildroot}%{_mandir}/%{namearch}/man1/mpiCC.1.gz
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# Remove dangling symlink
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rm %{buildroot}%{_mandir}/%{namearch}/man1/mpiCC.1
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mkdir %{buildroot}%{_mandir}/%{namearch}/man{2,4,5,6,8,9,n}
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# Make the environment-modules file
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mkdir -p %{buildroot}%{_datadir}/modulefiles/mpi
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# Since we're doing our own substitution here, use our own definitions.
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sed 's#@LIBDIR@#%{_libdir}/%{name}#;
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s#@ETCDIR@#%{_sysconfdir}/%{namearch}#;
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s#@FMODDIR@#%{_fmoddir}/%{name}#;
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s#@INCDIR@#%{_includedir}/%{namearch}#;
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s#@MANDIR@#%{_mandir}/%{namearch}#;
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%if %{with python2}
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s#@PY2SITEARCH@#%{python2_sitearch}/%{name}#;
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%else
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/@PY2SITEARCH@/d;
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%endif
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s#@PY3SITEARCH@#%{python3_sitearch}/%{name}#;
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s#@COMPILER@#openmpi-%{_arch}%{?_cc_name_suffix}#;
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s#@SUFFIX@#%{?_cc_name_suffix}_openmpi#' \
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<%{SOURCE1} \
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>%{buildroot}%{_datadir}/modulefiles/mpi/%{namearch}
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# make the rpm config file
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install -Dpm 644 %{SOURCE4} %{buildroot}/%{macrosdir}/macros.%{namearch}
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# Link the fortran module to proper location
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mkdir -p %{buildroot}%{_fmoddir}/%{name}
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for mod in %{buildroot}%{_libdir}/%{name}/lib/*.mod
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do
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modname=$(basename $mod)
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ln -s ../../../%{name}/lib/${modname} %{buildroot}/%{_fmoddir}/%{name}/
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done
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# Link the pkgconfig files into the main namespace as well
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mkdir -p %{buildroot}%{_libdir}/pkgconfig
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cd %{buildroot}%{_libdir}/pkgconfig
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ln -s ../%{name}/lib/pkgconfig/*.pc .
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cd -
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# Remove extraneous wrapper link libraries (bug 814798)
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sed -i -e s/-ldl// -e s/-lhwloc// \
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%{buildroot}%{_libdir}/%{name}/share/openmpi/*-wrapper-data.txt
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# install .pth files
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%if %{with python2}
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mkdir -p %{buildroot}/%{python2_sitearch}/%{name}
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install -pDm0644 %{SOURCE2} %{buildroot}/%{python2_sitearch}/openmpi.pth
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%endif
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mkdir -p %{buildroot}/%{python3_sitearch}/%{name}
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install -pDm0644 %{SOURCE3} %{buildroot}/%{python3_sitearch}/openmpi.pth
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%check
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make check
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%files
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%license LICENSE
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%dir %{_libdir}/%{name}
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%dir %{_sysconfdir}/%{namearch}
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%dir %{_libdir}/%{name}/bin
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%dir %{_libdir}/%{name}/lib
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%dir %{_libdir}/%{name}/lib/openmpi
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%dir %{_mandir}/%{namearch}
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%dir %{_mandir}/%{namearch}/man*
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%config(noreplace) %{_sysconfdir}/%{namearch}/*
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%{_libdir}/%{name}/bin/mpi[er]*
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%{_libdir}/%{name}/bin/ompi*
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%{_libdir}/%{name}/bin/orte[-dr_]*
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%if %{with ucx}
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%{_libdir}/%{name}/bin/oshmem_info
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%{_libdir}/%{name}/bin/oshrun
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%{_libdir}/%{name}/bin/shmemrun
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%endif
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%{_libdir}/%{name}/lib/*.so.40*
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%{_libdir}/%{name}/lib/libmca_common_ofi.so.10*
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%{_libdir}/%{name}/lib/libmca*.so.41*
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%{_libdir}/%{name}/lib/libmca*.so.50*
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%if 0%{?el7}
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%{_libdir}/%{name}/lib/pmix/
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%endif
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%{_mandir}/%{namearch}/man1/mpi[er]*
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%{_mandir}/%{namearch}/man1/ompi*
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%{_mandir}/%{namearch}/man1/orte[-dr_]*
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%if %{with ucx}
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%{_mandir}/%{namearch}/man1/oshmem_info*
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%{_mandir}/%{namearch}/man1/oshrun*
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%{_mandir}/%{namearch}/man1/shmemrun*
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%endif
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%{_mandir}/%{namearch}/man7/ompi_*
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%{_mandir}/%{namearch}/man7/opal_*
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%{_mandir}/%{namearch}/man7/orte*
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%{_libdir}/%{name}/lib/openmpi/*
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%{_datadir}/modulefiles/mpi/
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%dir %{_libdir}/%{name}/share
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%dir %{_libdir}/%{name}/share/openmpi
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%{_libdir}/%{name}/share/openmpi/amca-param-sets
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%{_libdir}/%{name}/share/openmpi/help*.txt
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%if %{with rdma}
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%{_libdir}/%{name}/share/openmpi/mca-btl-openib-device-params.ini
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||
|
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%endif
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||
|
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%if 0%{?el7}
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%{_libdir}/%{name}/share/pmix/
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|
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%endif
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|
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|
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%files devel
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%dir %{_includedir}/%{namearch}
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%{_libdir}/%{name}/bin/aggregate_profile.pl
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||
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%{_libdir}/%{name}/bin/mpi[cCf]*
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||
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%{_libdir}/%{name}/bin/opal_*
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||
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%{_libdir}/%{name}/bin/orte[cCf]*
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||
|
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%if %{with ucx}
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%{_libdir}/%{name}/bin/osh[cCf]*
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|
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%endif
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%{_libdir}/%{name}/bin/profile2mat.pl
|
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|
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%if %{with ucx}
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||
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%{_libdir}/%{name}/bin/shmem[cCf]*
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|
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%endif
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|
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%{_includedir}/%{namearch}/*
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%{_fmoddir}/%{name}/
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|
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%{_libdir}/%{name}/lib/*.so
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||
|
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%{_libdir}/%{name}/lib/*.mod
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||
|
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%{_libdir}/%{name}/lib/pkgconfig/
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||
|
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%{_libdir}/pkgconfig/*.pc
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||
|
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%{_mandir}/%{namearch}/man1/mpi[cCf]*
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||
|
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%if %{with ucx}
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%{_mandir}/%{namearch}/man1/osh[cCf]*
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||
|
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%{_mandir}/%{namearch}/man1/shmem[cCf]*
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||
|
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%endif
|
||
|
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%{_mandir}/%{namearch}/man1/opal_*
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||
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%{_mandir}/%{namearch}/man3/*
|
||
|
|
%{_libdir}/%{name}/share/openmpi/openmpi-valgrind.supp
|
||
|
|
%{_libdir}/%{name}/share/openmpi/*-wrapper-data.txt
|
||
|
|
%{macrosdir}/macros.%{namearch}
|
||
|
|
|
||
|
|
%files java
|
||
|
|
%{_libdir}/%{name}/lib/mpi.jar
|
||
|
|
|
||
|
|
%files java-devel
|
||
|
|
%{_libdir}/%{name}/bin/mpijavac
|
||
|
|
%{_libdir}/%{name}/bin/mpijavac.pl
|
||
|
|
# Currently this only contaings openmpi/javadoc
|
||
|
|
%{_libdir}/%{name}/share/doc/
|
||
|
|
%{_mandir}/%{namearch}/man1/mpijavac.1.gz
|
||
|
|
|
||
|
|
%if %{with python2}
|
||
|
|
%files -n python2-openmpi
|
||
|
|
%dir %{python2_sitearch}/%{name}
|
||
|
|
%{python2_sitearch}/openmpi.pth
|
||
|
|
%endif
|
||
|
|
|
||
|
|
%files -n python%{python3_pkgversion}-openmpi
|
||
|
|
%dir %{python3_sitearch}/%{name}
|
||
|
|
%{python3_sitearch}/openmpi.pth
|
||
|
|
|
||
|
|
|
||
|
|
%changelog
|
||
|
|
* Wed Feb 16 2022 Honggang Li <honli@redhat.com> - 4.1.1-3
|
||
|
|
- Revert upstream v4.1.2
|
||
|
|
- Add Epoch tag
|
||
|
|
- Related: rhbz#2055183
|
||
|
|
|
||
|
|
* Wed Jul 21 2021 Honggang Li <honli@redhat.com> - 4.1.1-2
|
||
|
|
- fbtl-posix: link to common_ompio
|
||
|
|
- Require environment(modules)
|
||
|
|
- Revert upstream commit c36d7459b6331c4da82
|
||
|
|
- Resolves: rhbz#1974780, rhbz#1971771
|
||
|
|
|
||
|
|
* Wed Jun 09 2021 Honggang Li <honli@redhat.com> - 4.1.1-1
|
||
|
|
- Update to upstream v4.1.1 release
|
||
|
|
- Sync with Fedora build
|
||
|
|
- Resolves: rhbz#1928631, rhbz#1920801
|
||
|
|
|
||
|
|
* Wed Jan 27 2021 Honggang Li <honli@redhat.com> - 4.0.5-3
|
||
|
|
- disable gcc built-in atomics
|
||
|
|
- Resolves: rhbz#1921262
|
||
|
|
|
||
|
|
* Tue Nov 17 2020 Honggang Li <honli@redhat.com> - 4.0.5-2
|
||
|
|
- Rebuild against ucx-1.9 and libfabric-1.11.1
|
||
|
|
- Resolves: rhbz#1892128
|
||
|
|
|
||
|
|
* Mon Oct 12 2020 Honggang Li <honli@redhat.com> - 4.0.5-1
|
||
|
|
- Update to upstream v4.0.5 release
|
||
|
|
- Build against hwloc-2.2
|
||
|
|
- Resolves: rhbz#1850088,rhbz#1855197
|
||
|
|
|
||
|
|
* Tue Jul 28 2020 Honggang Li <honli@redhat.com> - 4.0.3-3
|
||
|
|
- Fix module load overwrites system MANPATH
|
||
|
|
- Resolves: rhbz#1858519
|
||
|
|
|
||
|
|
* Tue May 12 2020 Honggang Li <honli@redhat.com> - 4.0.3-1
|
||
|
|
- Update to upstream v4.0.3 release
|
||
|
|
- Resolves: rhbz#1817834
|
||
|
|
|
||
|
|
* Sun Jan 19 2020 Honggang Li <honli@redhat.com> - 4.0.2-2
|
||
|
|
- Rebuild against ucx-1.6
|
||
|
|
- Resolves: rhbz#1791483
|
||
|
|
|
||
|
|
* Wed Oct 16 2019 Jarod Wilson <jarod@redhat.com> - 4.0.2-1
|
||
|
|
- Update to upstream v4.0.2 release
|
||
|
|
- Resolves: rhbz#1725631
|
||
|
|
|
||
|
|
* Thu Aug 01 2019 Jarod Wilson <jarod@redhat.com> - 4.0.1-3
|
||
|
|
- Actually enable UCX support
|
||
|
|
- Resolves: rhbz#1642942
|
||
|
|
|
||
|
|
* Wed Jun 19 2019 Jarod Wilson <jarod@redhat.com> - 4.0.1-2
|
||
|
|
- Bump and rebuild for newer opensm
|
||
|
|
- Resolves: rhbz#1717289
|
||
|
|
|
||
|
|
* Mon Apr 29 2019 Jarod Wilson <jarod@redhat.com> - 4.0.1-1
|
||
|
|
- Update to upstream v4.0.1 release
|
||
|
|
- Resolves: rhbz#1660623
|
||
|
|
|
||
|
|
* Tue Sep 25 2018 Jarod Wilson <jarod@redhat.com> - 3.1.2-5
|
||
|
|
- Update BR: opensm-devel min version and rebuild against opensm 3.3.21
|
||
|
|
- Resolves: rhbz#1630653
|
||
|
|
|
||
|
|
* Mon Sep 24 2018 Jarod Wilson <jarod@redhat.com> - 3.1.2-4
|
||
|
|
- Further tweaks to compile/linker flag usage
|
||
|
|
- Related: rhbz#1624157
|
||
|
|
- Move modulefiles under /etc like our other suppored mpi providers
|
||
|
|
- Resolves: rhbz#1632399
|
||
|
|
|
||
|
|
* Tue Sep 18 2018 Jarod Wilson <jarod@redhat.com> - 3.1.2-3
|
||
|
|
- Undo stripping/ignoring of distro-provided optimization flags
|
||
|
|
- Related: rhbz#1624157
|
||
|
|
|
||
|
|
* Wed Sep 12 2018 Jarod Wilson <jarod@redhat.com> - 3.1.2-2
|
||
|
|
- Additional tweaks to module paths, fix openmpi-devel R
|
||
|
|
- Related: rhbz#1623441
|
||
|
|
|
||
|
|
* Wed Sep 12 2018 Jarod Wilson <jarod@redhat.com> - 3.1.2-1
|
||
|
|
- Update to upstream 3.1.2 bug fix release
|
||
|
|
- Fix some paths in module file, strip out python2 bits
|
||
|
|
- Related: rhbz#1623441
|
||
|
|
|
||
|
|
* Thu Aug 30 2018 Jarod Wilson <jarod@redhat.com> - 3.1.1-2
|
||
|
|
- Bump and rebuild for autogen rpmbuild library dependency fixes
|
||
|
|
- Related: rhbz#1623441
|
||
|
|
|
||
|
|
* Mon Jul 02 2018 Jarod Wilson <jarod@redhat.com> - 3.1.1-1
|
||
|
|
- Update to upstream 3.1.1 bug fix release
|
||
|
|
- Drop BR: on deprecated infinipath-psm
|
||
|
|
|
||
|
|
* Thu May 31 2018 Jarod Wilson <jarod@redhat.com> - 3.1.0-1
|
||
|
|
- Update to upstream 3.1.0 release
|
||
|
|
- Use external pmix and libevent
|
||
|
|
|
||
|
|
* Thu May 17 2018 Charalampos Stratakis <cstratak@redhat.com> - 2.1.1-11
|
||
|
|
- Do not build the python2 subpackage on EL > 7
|
||
|
|
|
||
|
|
* Wed May 09 2018 Troy Dawson <tdawson@redhat.com> - 2.1.1-10
|
||
|
|
- Build with rdma-core-devel instead of libibcm-devel
|
||
|
|
|
||
|
|
* Fri Feb 09 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 2.1.1-9
|
||
|
|
- Escape macros in %%changelog
|
||
|
|
|
||
|
|
* Mon Feb 05 2018 Orion Poplawski <orion@cora.nwra.com> - 2.1.1-8
|
||
|
|
- Rebuild for rdma-core 16.2
|
||
|
|
|
||
|
|
* Wed Jan 31 2018 Christoph Junghans <junghans@votca.org> - 2.1.1-7
|
||
|
|
- Rebuild for gfortran-8
|
||
|
|
|
||
|
|
* Fri Jan 12 2018 Iryna Shcherbina <ishcherb@redhat.com> - 2.1.1-6
|
||
|
|
- Update Python 2 dependency declarations to new packaging standards
|
||
|
|
(See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
|
||
|
|
|
||
|
|
* Wed Aug 23 2017 Adam Williamson <awilliam@redhat.com> - 2.1.1-5
|
||
|
|
- Disable RDMA support on 32-bit ARM (#1484155)
|
||
|
|
- Disable hanging opal_fifo test on ppc64le (gh #2526 / #2966)
|
||
|
|
|
||
|
|
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.1.1-4
|
||
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
|
||
|
|
|
||
|
|
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.1.1-3
|
||
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
|
||
|
|
|
||
|
|
* Wed Jul 19 2017 Orion Poplawski <orion@cora.nwra.com> - 2.1.1-2
|
||
|
|
- Provide pkgconfig files in the main namespace as well (1471512)
|
||
|
|
|
||
|
|
* Fri May 12 2017 Orion Poplawski <orion@cora.nwra.com> - 2.1.1-1
|
||
|
|
- Update to 2.1.1
|
||
|
|
|
||
|
|
* Thu May 4 2017 Orion Poplawski <orion@cora.nwra.com> - 2.1.0-1
|
||
|
|
- Update to 2.1.0
|