diff -up ./java/test_applet.html.orig ./java/test_applet.html
--- ./java/test_applet.html.orig 2008-02-04 10:11:00.000000000 +1000
+++ ./java/test_applet.html 2008-02-04 10:13:02.000000000 +1000
@@ -1 +1,3 @@
-
+
+
+
diff -up ./java/svm_train.java.orig ./java/svm_train.java
diff -up ./java/libsvm/svm_parameter.java.orig ./java/libsvm/svm_parameter.java
--- ./java/libsvm/svm_parameter.java.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/libsvm/svm_parameter.java 2008-02-04 10:13:02.000000000 +1000
@@ -1,6 +1,7 @@
package libsvm;
public class svm_parameter implements Cloneable,java.io.Serializable
{
+ static final long serialVersionUID = 2709444323471798245L;
/* svm_type */
public static final int C_SVC = 0;
public static final int NU_SVC = 1;
diff -up ./java/libsvm/svm_problem.java.orig ./java/libsvm/svm_problem.java
--- ./java/libsvm/svm_problem.java.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/libsvm/svm_problem.java 2008-02-04 10:13:02.000000000 +1000
@@ -1,6 +1,7 @@
package libsvm;
public class svm_problem implements java.io.Serializable
{
+ static final long serialVersionUID = -4451389443706847272L;
public int l;
public double[] y;
public svm_node[][] x;
diff -up ./java/libsvm/svm_node.java.orig ./java/libsvm/svm_node.java
--- ./java/libsvm/svm_node.java.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/libsvm/svm_node.java 2008-02-04 10:13:02.000000000 +1000
@@ -1,6 +1,7 @@
package libsvm;
public class svm_node implements java.io.Serializable
{
+ static final long serialVersionUID = 2709444323471798245L;
public int index;
public double value;
}
diff -up ./java/libsvm/svm_model.java.orig ./java/libsvm/svm_model.java
--- ./java/libsvm/svm_model.java.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/libsvm/svm_model.java 2008-02-04 10:13:02.000000000 +1000
@@ -4,6 +4,7 @@
package libsvm;
public class svm_model implements java.io.Serializable
{
+ static final long serialVersionUID = 2709444323471798245L;
svm_parameter param; // parameter
int nr_class; // number of classes, = 2 in regression/one class svm
int l; // total #SV
diff -up ./java/libsvm/svm.java.orig ./java/libsvm/svm.java
diff -up ./java/Makefile.orig ./java/Makefile
--- ./java/Makefile.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/Makefile 2008-02-04 14:26:38.000000000 +1000
@@ -3,13 +3,22 @@ FILES = libsvm/svm.class libsvm/svm_mode
libsvm/svm_parameter.class libsvm/svm_problem.class \
svm_train.class svm_predict.class svm_toy.class
-#JAVAC = jikes
-JAVAC_FLAGS = -target 1.5 -source 1.5
-JAVAC = javac
-# JAVAC_FLAGS =
+JAVA_TARGETDIR=${INSTDIR}/share/libsvm/java
+JAVA_DOCDIR=${INSTDIR}/share/javadoc/libsvm-${LIBSVM_VER}
+CLASSPATH = .
+JAVAC_FLAGS = -target 1.5 -source 1.5 -classpath ${CLASSPATH}
+
+ifndef JAVAC
+JAVAC=javac
+endif
+
+ifndef JAR
+JAR=jar
+endif
+
all: $(FILES)
- jar cvf libsvm.jar *.class libsvm/*.class
+ ${JAR} cvf libsvm.jar *.class libsvm/*.class
.java.class:
$(JAVAC) $(JAVAC_FLAGS) $<
@@ -17,8 +26,22 @@ all: $(FILES)
libsvm/svm.java: libsvm/svm.m4
m4 libsvm/svm.m4 > libsvm/svm.java
+javadoc:
+ javadoc -d docs *.java libsvm/*.java
+
+install:
+ mkdir -p ${JAVA_TARGETDIR}
+ install -m 644 libsvm.jar ${JAVA_TARGETDIR}
+ install -m 644 test_applet.html ${JAVA_TARGETDIR}
+# mkdir -p ${JAVA_DOCDIR}
+# cd docs; cp -R * ${JAVA_DOCDIR}
+uninstall:
+ rm -fr ${JAVA_TARGETDIR}
+ rm -fr ${JAVA_DOCDIR}
+
clean:
rm -f libsvm/*.class *.class *.jar libsvm/*~ *~ libsvm/svm.java
+ rm -rf docs
dist: clean all
rm *.class libsvm/*.class
diff -up ./java/svm_toy.java.orig ./java/svm_toy.java
--- ./java/svm_toy.java.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./java/svm_toy.java 2008-02-04 10:13:02.000000000 +1000
@@ -6,7 +6,7 @@ import java.awt.event.*;
import java.io.*;
public class svm_toy extends Applet {
-
+ static final long serialVersionUID = -8325676470152687806L;
static final String DEFAULT_PARAM="-t 2 -c 100";
int XLEN;
int YLEN;
@@ -453,6 +453,7 @@ public class svm_toy extends Applet {
}
class AppletFrame extends Frame {
+ static final long serialVersionUID = -8428435143024670779L;
AppletFrame(String title, Applet applet, int width, int height)
{
super(title);
diff -up ./java/svm_predict.java.orig ./java/svm_predict.java
diff -up ./python/cross_validation.py.orig ./python/cross_validation.py
diff -up ./python/svm_test.py.orig ./python/svm_test.py
diff -up ./python/Makefile.orig ./python/Makefile
--- ./python/Makefile.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./python/Makefile 2008-02-05 09:37:16.000000000 +1000
@@ -2,9 +2,16 @@ CXX? = g++
SWIG ?= swig
#Windows: see ../README ../Makefile.win
-PYTHON_INCLUDEDIR ?= /usr/include/python2.4
+#PYTHON_TEMP:=${shell mktemp}
+#PYTHON_VERSION:=${shell python -V 2> ${PYTHON_TEMP} ; cat ${PYTHON_TEMP} | awk 'BEGIN {FS= "[ .]"} {printf("%s.%s",$$2,$$3)}'; rm -f ${PYTHON_TEMP}}
+ifndef PYTHON_INCLUDEDIR
-CFLAGS = -O3 -I$(PYTHON_INCLUDEDIR) -I..
+PYTHON_INCLUDEDIR?= /usr/include/python${PYTHON_VERSION}
+
+endif
+PYTHON_TARGETDIR=${LIB_INSTDIR}/python${PYTHON_VERSION}/site-packages/libsvm
+
+CFLAGS_PYTHON = ${CFLAGS} -O3 -I$(PYTHON_INCLUDEDIR) -I..
LDFLAGS = -shared
# Mac OS
# LDFLAGS = -framework Python -bundle
@@ -15,16 +22,34 @@ svmc.so: svmc_wrap.o svm.o
$(CXX) $(LDFLAGS) -o svmc.so svmc_wrap.o svm.o
svmc_wrap.o: svmc_wrap.c ../svm.h
- $(CXX) $(CFLAGS) -fPIC -c svmc_wrap.c
+# echo "PYTHON_VERSION=${PYTHON_VERSION}"
+# echo "CFLAGS=${CFLAGS}"
+# echo "CFLAGS_PYTHON=${CFLAGS_PYTHON}"
+ $(CXX) $(CFLAGS_PYTHON) -fPIC -c svmc_wrap.c
svmc_wrap.c: svmc.i
$(SWIG) -python -noproxy svmc.i
svm.o: ../svm.cpp ../svm.h
- $(CXX) $(CFLAGS) -fPIC -c ../svm.cpp
+ $(CXX) $(CFLAGS_PYTHON) -fPIC -c ../svm.cpp
clean:
rm -f *~ *.o *.so *.pyc *.pyo svm.o
moreclean: clean
rm -f svmc_wrap.c
+
+
+install: all
+ mkdir -p ${PYTHON_TARGETDIR}
+ install -m 755 cross_validation.py ${PYTHON_TARGETDIR}
+ install -m 644 svm.py ${PYTHON_TARGETDIR}
+ install -m 755 svm_test.py ${PYTHON_TARGETDIR}
+ install -m 755 test_cross_validation.py ${PYTHON_TARGETDIR}
+ install -m 644 *.i ${PYTHON_TARGETDIR}
+ install -m 755 *.so ${PYTHON_TARGETDIR}
+ install -m 755 ../tools/*.py ${PYTHON_TARGETDIR}
+
+uninstall:
+ rm -fr ${LIBDIR}/python${PYTHON_VERSION}/site-packages/libsvm
+
diff -up ./python/test_cross_validation.py.orig ./python/test_cross_validation.py
diff -up ./python/svm.py.orig ./python/svm.py
diff -up ./tools/subset.py.orig ./tools/subset.py
diff -up ./tools/checkdata.py.orig ./tools/checkdata.py
diff -up ./tools/easy.py.orig ./tools/easy.py
--- ./tools/easy.py.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./tools/easy.py 2008-02-04 10:23:49.000000000 +1000
@@ -2,6 +2,7 @@
import sys
import os
+from distutils.sysconfig import get_python_lib
from subprocess import *
if len(sys.argv) <= 1:
@@ -12,10 +13,10 @@ if len(sys.argv) <= 1:
is_win32 = (sys.platform == 'win32')
if not is_win32:
- svmscale_exe = "../svm-scale"
- svmtrain_exe = "../svm-train"
- svmpredict_exe = "../svm-predict"
- grid_py = "./grid.py"
+ svmscale_exe = "/usr/bin/svm-scale"
+ svmtrain_exe = "/usr/bin/svm-train"
+ svmpredict_exe = "/usr/bin/svm-predict"
+ grid_py = get_python_lib(1)+"/libsvm/grid.py"
gnuplot_exe = "/usr/bin/gnuplot"
else:
# example for windows
diff -up ./tools/grid.py.orig ./tools/grid.py
--- ./tools/grid.py.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./tools/grid.py 2008-02-04 10:13:02.000000000 +1000
@@ -11,7 +11,7 @@ from subprocess import *
is_win32 = (sys.platform == 'win32')
if not is_win32:
- svmtrain_exe = "../svm-train"
+ svmtrain_exe = "/usr/bin/svm-train"
gnuplot_exe = "/usr/bin/gnuplot"
else:
# example for windows
@@ -88,6 +88,7 @@ Usage: grid.py [-log2c begin,end,step] [
i = i + 1
pass_through_string = join(pass_through_options," ")
+ print 'dataset_pathname=%s' % dataset_pathname
assert os.path.exists(svmtrain_exe),"svm-train executable not found"
assert os.path.exists(gnuplot_exe),"gnuplot executable not found"
assert os.path.exists(dataset_pathname),"dataset not found"
diff -up ./Makefile.orig ./Makefile
--- ./Makefile.orig 2007-11-06 23:32:49.000000000 +1000
+++ ./Makefile 2008-02-06 15:12:25.000000000 +1000
@@ -1,15 +1,111 @@
CXX? = g++
CFLAGS = -Wall -O3
+MAKE = make
+LIBSVM_VER_MAJOR=2
+LIBSVM_VER_MINOR=85
+LIBSVM_VER=${LIBSVM_VER_MAJOR}.${LIBSVM_VER_MINOR}
+DOT_LIBS=.libs
+LIBS= -L${DOT_LIBS} -lsvm
-all: svm-train svm-predict svm-scale
+export LIBSVM_VER
-svm-predict: svm-predict.c svm.o
- $(CXX) $(CFLAGS) svm-predict.c svm.o -o svm-predict -lm
-svm-train: svm-train.c svm.o
- $(CXX) $(CFLAGS) svm-train.c svm.o -o svm-train -lm
-svm-scale: svm-scale.c
- $(CXX) $(CFLAGS) svm-scale.c -o svm-scale
-svm.o: svm.cpp svm.h
- $(CXX) $(CFLAGS) -c svm.cpp
+ifndef DESTDIR
+INSTDIR=/usr
+else
+INSTDIR=${DESTDIR}/usr
+endif
+
+export INSTDIR
+
+IS_64=$(shell /bin/uname -i | awk '/64/ {print 64}')
+
+ifndef LIBDIR
+LIB_INSTDIR=${INSTDIR}/lib${IS_64}
+else
+LIB_INSTDIR=${INSTDIR}/..${LIBDIR}
+endif
+
+ifndef LIBDIR
+LIBDIR=/usr/lib${IS_64}
+endif
+
+export LIBDIR
+export LIB_INSTDIR
+
+all: svm-train svm-predict svm-scale svm-python svm-java svm-lib svm-toy-gtk svm-toy-qt
+
+svm-lib: %{DOT_LIBS}/libsvm.so
+
+%{DOT_LIBS}/libsvm.so: svm-share.o
+ $(CXX) -shared -Wl,-soname,libsvm.so.${LIBSVM_VER_MAJOR}\
+ -o libsvm.so.${LIBSVM_VER} svm-share.o -lm
+ mkdir -p .libs
+ cd ${DOT_LIBS}; ln -sf ../libsvm.so.${LIBSVM_VER} libsvm.so
+svm-share.o: svm.cpp svm.h
+ $(CXX) -g -fPIC $(CFLAGS) -c svm.cpp -o svm-share.o
+svm-predict: svm-predict.c %{DOT_LIBS}/libsvm.so
+ $(CXX) $(CFLAGS) svm-predict.c -o svm-predict $(LIBS) -lm
+svm-train: svm-train.c %{DOT_LIBS}/libsvm.so
+ $(CXX) $(CFLAGS) svm-train.c -o svm-train $(LIBS) -lm
+svm-scale: svm-scale.c %{DOT_LIBS}/libsvm.so
+ $(CXX) $(CFLAGS) svm-scale.c -o svm-scale $(LIBS)
+#svm.o: svm.cpp svm.h
+# $(CXX) $(CFLAGS) -c svm.cpp
clean:
- rm -f *~ svm.o svm-train svm-predict svm-scale
+ rm -f *~ svm.o svm-train svm-predict svm-scale svm-toy/gtk/svm-toy-gtk svm-toy/qt/svm-toy-qt
+ ${MAKE} -C python clean
+ ${MAKE} -C java clean
+svm-python:
+ ${MAKE} -C python
+svm-java:
+ ${MAKE} -C java
+svm-toy-gtk:
+ ${MAKE} -C svm-toy/gtk
+svm-toy-qt:
+ ${MAKE} -C svm-toy/qt
+
+install: all
+ mkdir -p ${INSTDIR}/bin
+ install -m 755 svm-train ${INSTDIR}/bin
+ install -m 755 svm-predict ${INSTDIR}/bin
+ install -m 755 svm-scale ${INSTDIR}/bin
+ mkdir -p ${LIB_INSTDIR}
+ install -m 755 libsvm.so.${LIBSVM_VER} ${LIB_INSTDIR}
+ /sbin/ldconfig -n ${LIB_INSTDIR}
+ cd ${LIB_INSTDIR}; ln -fs libsvm.so.${LIBSVM_VER_MAJOR} libsvm.so
+# install package libsvm-devel
+ mkdir -p ${INSTDIR}/include/libsvm
+ install -m 644 svm.h ${INSTDIR}/include/libsvm
+ mkdir -p ${INSTDIR}/share/libsvm/src/java/libsvm
+ install -m 644 *.h ${INSTDIR}/share/libsvm/src
+ install -m 644 *.c ${INSTDIR}/share/libsvm/src
+ install -m 644 *.cpp ${INSTDIR}/share/libsvm/src
+ install -m 644 Makefile ${INSTDIR}/share/libsvm/src
+ install -m 644 java/*.java ${INSTDIR}/share/libsvm/src/java
+ install -m 644 java/Makefile ${INSTDIR}/share/libsvm/src/java
+ install -m 644 java/libsvm/*.java ${INSTDIR}/share/libsvm/src/java/libsvm
+ install -m 644 java/libsvm/*.m4 ${INSTDIR}/share/libsvm/src/java/libsvm
+# install package libsvm-python
+ ${MAKE} -C python install
+# install package libsvm-java
+ ${MAKE} -C java install
+# install package svm-toy
+ install -m 755 svm-toy/gtk/svm-toy-gtk ${INSTDIR}/bin
+ install -m 755 svm-toy/qt/svm-toy-qt ${INSTDIR}/bin
+# install examples
+ mkdir -p ${INSTDIR}/share/libsvm/examples
+ install -m 644 heart_scale ${INSTDIR}/share/libsvm/examples
+uninstall:
+ rm -f ${INSTDIR}/bin/svm-train
+ rm -f ${INSTDIR}/bin/svm-predict
+ rm -f ${INSTDIR}/bin/svm-scale
+ rm -fr ${INSTDIR}/libsvm/examples
+ rm -f ${INSTDIR}/include/libsvm/svm.h
+ rm -f ${LIB_INSTDIR}/libsvm/svm.o
+ rm -fr ${INSTDIR}/libsvm/src
+ rm -fr ${INSTDIR}/libsvm
+ ${MAKE} -C python uninstall
+ ${MAKE} -C java uninstall
+ rm -f ${INSTDIR}/bin/svm-toy-gtk
+ rm -f ${INSTDIR}/bin/svm-toy-qt
+
diff -up ./svm-toy/qt/Makefile.orig ./svm-toy/qt/Makefile
--- ./svm-toy/qt/Makefile.orig 2008-02-04 15:59:51.000000000 +1000
+++ ./svm-toy/qt/Makefile 2008-02-06 15:08:55.000000000 +1000
@@ -1,19 +1,23 @@
CXX? = g++
CFLAGS = -Wall -O3 -DQT_THREAD_SUPPORT
+QTDIR = $(LIBDIR)/qt-3.3
BIN = $(QTDIR)/bin
INCLUDE = $(QTDIR)/include
LIB = $(QTDIR)/lib
-#BIN = /usr/bin
-#INCLUDE = /usr/include/qt3
-#LIB = /usr/lib/qt3
+DOT_LIBS=../../.libs
+LIBS= -L${DOT_LIBS} -lsvm
-svm-toy: svm-toy.cpp svm-toy.moc ../../svm.o
- $(CXX) -I$(INCLUDE) $(CFLAGS) svm-toy.cpp ../../svm.o -o svm-toy -L$(LIB) -lqt-mt
+all: svm-toy-qt
+
+svm-toy-qt: svm-toy.cpp svm-toy.moc ../../svm.o
+ $(CXX) -I$(INCLUDE) $(CFLAGS) svm-toy.cpp ../../svm.o -o svm-toy-qt -L$(LIB) $(LIBS) -lqt-mt
# add -pthread for bsd
svm-toy.moc: svm-toy.cpp
+ echo "LIBDIR=${LIBDIR}"
+ echo "QTDIR=${QTDIR}"
$(BIN)/moc svm-toy.cpp -o svm-toy.moc
-../../svm.o:
- cd ../..; make svm.o
+#../../svm.o:
+# cd ../..; make svm.o
clean:
rm -f *~ svm-toy svm-toy.moc ../../svm.o
diff -up ./svm-toy/gtk/Makefile.orig ./svm-toy/gtk/Makefile
--- ./svm-toy/gtk/Makefile.orig 2008-02-04 15:44:19.000000000 +1000
+++ ./svm-toy/gtk/Makefile 2008-02-06 15:08:10.000000000 +1000
@@ -1,22 +1,28 @@
CC? = gcc
CXX? = g++
-CFLAGS = -Wall -O3 -g `gtk-config --cflags`
-LIBS = `gtk-config --libs`
+#CFLAGS = -Wall -O3 -g `gtk-config --cflags`
+#LIBS = `gtk-config --libs`
+COPT = `pkg-config --cflags --libs gtk+-2.0`
+DOT_LIBS=../../.libs
+LIBS= -L${DOT_LIBS} -lsvm
-svm-toy: main.o interface.o callbacks.o ../../svm.o
- $(CXX) $(CFLAGS) main.o interface.o callbacks.o ../../svm.o -o svm-toy $(LIBS)
+
+all: svm-toy-gtk
+
+svm-toy-gtk: main.o interface.o callbacks.o
+ $(CXX) $(COPT) main.o interface.o callbacks.o ${LIBS} -o svm-toy-gtk
main.o: main.c
- $(CC) $(CFLAGS) -c main.c
+ $(CC) $(COPT) -c main.c
interface.o: interface.c interface.h
- $(CC) $(CFLAGS) -c interface.c
+ $(CC) $(COPT) -c interface.c
callbacks.o: callbacks.cpp callbacks.h
- $(CXX) $(CFLAGS) -c callbacks.cpp
+ $(CXX) $(COPT) -c callbacks.cpp
-../../svm.o:
- cd ../..; make svm.o
+#../../svm.o:
+# cd ../..; make svm.o
clean:
- rm -f *~ callbacks.o svm-toy main.o interface.o callbacks.o ../../svm.o
+ rm -f *~ callbacks.o svm-toy main.o interface.o callbacks.o
diff -up ./svm-toy/gtk/callbacks.cpp.orig ./svm-toy/gtk/callbacks.cpp
--- ./svm-toy/gtk/callbacks.cpp.orig 2008-02-05 09:43:28.000000000 +1000
+++ ./svm-toy/gtk/callbacks.cpp 2008-02-05 09:43:42.000000000 +1000
@@ -2,6 +2,7 @@
#include
#include
#include
+#include
#include "callbacks.h"
#include "interface.h"
#include "../../svm.h"